KEGG   Setaria viridis (green foxtail): 117864265
Entry
117864265         CDS       T07951                                 
Name
(RefSeq) autophagy-related protein 13a
  KO
K08331  autophagy-related protein 13
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:svs00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    117864265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:svs04131]
    117864265
   03029 Mitochondrial biogenesis [BR:svs03029]
    117864265
Membrane trafficking [BR:svs04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    117864265
   Atg1 complex
    117864265
Mitochondrial biogenesis [BR:svs03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    117864265
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-GeneID: 117864265
NCBI-ProteinID: XP_034604198
LinkDB
Position
1:complement(32285519..32291181)
AA seq 540 aa
MASLSDSAGAGGSGGGRAGAELMVPQFLHKTLHAILAVRSPRPHASATAATAAAFRRRDR
WFHLPLHSPPPPPAAEHLPEPSPGEPLVVDVYLSPSGGGGGAEEVVERWTVACEPWPSAA
AAAAVGEGLAVNRAYKRCITLLRSLYAALRFLPAYRAFRTLCASGQVYNYEMGHRVGSFA
APFSRAEEAAMRTNRFAPVETQLGRLVVSVQYRPSLAAFNFEVTSLAPAAIIMDYVGSPA
ADPMRAFPASLTEAAGSPSSQPLRRPSSWASPAPWPHTPGQQAKFSPPPTHYASPTPSPP
TFGYLHSRFSGETAPMSIPQVGGGRGPVHHRNMSEPTRAFMFPPPSPKSVRGEAGMQESL
TEANRSFKRADGIRMGDLYANLPSGSKIKDSRDESGRFSGVFSSSGSPRLGFSRSSSRLS
MQDDTDDADFPFAVDDVDPDSRPGSSSGKDVGDQAGSSSHKSQDAAVGYLVHLLKSARPL
RDSSYSTHTSRAESIEAGSTSSFMSRRTSDALEELESFREIKENLLARSRSRLQDSLDKP
NT seq 1623 nt   +upstreamnt  +downstreamnt
atggcgagcctgtcggattcggcgggtgcgggcggaagcggagggggccgcgcgggcgcg
gagctgatggtgccgcagttcctgcacaagacgctgcacgctatcctcgccgtgcggtcg
ccgcgcccgcacgcgtcggcgaccgcggccacggcggcggcgttcaggaggcgggacagg
tggttccacctgccgctccactcgccgccgcccccgcccgcggcggagcacctgccggag
ccgtcccccggggagccgctcgtcgtcgacgtgtacctctccccgtcgggcggcggcggc
ggggcggaggaggtggtggagcggtggaccgtggcgtgcgagccctggccctcggccgcc
gcggcggcagcggtgggggaggggctggcggtcaaccgggcgtacaagcgctgcatcacg
ctgctgcggtcgctctacgccgcgctccgcttccttccagcttaccgcgccttccgcacg
ctctgcgcgtctggccaggtgtacaactacgagatgggccaccgcgtcggctccttcgcc
gcgcccttctcccgcgccgaggaggcagccatgcgcaccaaccgcttcgcccccgtcgag
acccagctcggccgcctcgtcgtctccgtccagtaccgccccagcctcgccgccttcaat
ttcgaggtcacctccctcgcgcccgccgcgatcatcatggattacgtcggcagcccggcg
gccgatcctatgcgcgccttcccggcctcgctcacggaggccgccggctcgccctcttcg
cagcccttgcggcgccccagcagctgggcgtcacctgcgccctggccgcacaccccgggg
cagcaggcgaaattctcgccgccgccgacccattacgcgtcccccacgccctcgccgccc
acgtttggatacctgcactcgcggtttagcggcgagactgcgccaatgagcataccgcag
gtgggcggtggcaggggccctgtgcaccatcggaacatgtcggaacccacccgagccttc
atgtttcctccaccctcgcccaagagtgtgcgaggggaggcagggatgcaggagtccctg
actgaggccaatcggtcgttcaagagggcagatggcatccggatgggcgatctctatgct
aacttgccatctggttcaaagattaaggacagtagggatgaatctggcaggttctctggt
gtcttctcttctagtggttcaccacgactcgggttctcaagaagttcaagcagattgtct
atgcaggatgatactgatgacgcggattttcctttcgctgttgatgatgttgatccagat
tcccgaccagggagtagcagtgggaaggacgtcggggatcaggcaggttcctcatcccat
aaatcacaagacgctgctgtcggttatcttgtccacctgctaaagtctgcacgtccactg
cgagattctagctactcaactcatacatcaagggccgaatctattgaagctggaagcaca
agctccttcatgtcccgcaggacatctgacgcacttgaggagctcgaatctttcagagaa
ataaaggagaacctgctagcacgtagtagatctaggctgcaggattcattggataaaccc
tag

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