Setaria viridis (green foxtail): 117864265
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Entry
117864265 CDS
T07951
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
117864265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117864265
03029 Mitochondrial biogenesis [BR:
svs03029
]
117864265
Membrane trafficking [BR:
svs04131
]
Autophagy
Autophagosome formation proteins
ULK complex
117864265
Atg1 complex
117864265
Mitochondrial biogenesis [BR:
svs03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117864265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
117864265
NCBI-ProteinID:
XP_034604198
LinkDB
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Position
1:complement(32285519..32291181)
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AA seq
540 aa
AA seq
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MASLSDSAGAGGSGGGRAGAELMVPQFLHKTLHAILAVRSPRPHASATAATAAAFRRRDR
WFHLPLHSPPPPPAAEHLPEPSPGEPLVVDVYLSPSGGGGGAEEVVERWTVACEPWPSAA
AAAAVGEGLAVNRAYKRCITLLRSLYAALRFLPAYRAFRTLCASGQVYNYEMGHRVGSFA
APFSRAEEAAMRTNRFAPVETQLGRLVVSVQYRPSLAAFNFEVTSLAPAAIIMDYVGSPA
ADPMRAFPASLTEAAGSPSSQPLRRPSSWASPAPWPHTPGQQAKFSPPPTHYASPTPSPP
TFGYLHSRFSGETAPMSIPQVGGGRGPVHHRNMSEPTRAFMFPPPSPKSVRGEAGMQESL
TEANRSFKRADGIRMGDLYANLPSGSKIKDSRDESGRFSGVFSSSGSPRLGFSRSSSRLS
MQDDTDDADFPFAVDDVDPDSRPGSSSGKDVGDQAGSSSHKSQDAAVGYLVHLLKSARPL
RDSSYSTHTSRAESIEAGSTSSFMSRRTSDALEELESFREIKENLLARSRSRLQDSLDKP
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcctgtcggattcggcgggtgcgggcggaagcggagggggccgcgcgggcgcg
gagctgatggtgccgcagttcctgcacaagacgctgcacgctatcctcgccgtgcggtcg
ccgcgcccgcacgcgtcggcgaccgcggccacggcggcggcgttcaggaggcgggacagg
tggttccacctgccgctccactcgccgccgcccccgcccgcggcggagcacctgccggag
ccgtcccccggggagccgctcgtcgtcgacgtgtacctctccccgtcgggcggcggcggc
ggggcggaggaggtggtggagcggtggaccgtggcgtgcgagccctggccctcggccgcc
gcggcggcagcggtgggggaggggctggcggtcaaccgggcgtacaagcgctgcatcacg
ctgctgcggtcgctctacgccgcgctccgcttccttccagcttaccgcgccttccgcacg
ctctgcgcgtctggccaggtgtacaactacgagatgggccaccgcgtcggctccttcgcc
gcgcccttctcccgcgccgaggaggcagccatgcgcaccaaccgcttcgcccccgtcgag
acccagctcggccgcctcgtcgtctccgtccagtaccgccccagcctcgccgccttcaat
ttcgaggtcacctccctcgcgcccgccgcgatcatcatggattacgtcggcagcccggcg
gccgatcctatgcgcgccttcccggcctcgctcacggaggccgccggctcgccctcttcg
cagcccttgcggcgccccagcagctgggcgtcacctgcgccctggccgcacaccccgggg
cagcaggcgaaattctcgccgccgccgacccattacgcgtcccccacgccctcgccgccc
acgtttggatacctgcactcgcggtttagcggcgagactgcgccaatgagcataccgcag
gtgggcggtggcaggggccctgtgcaccatcggaacatgtcggaacccacccgagccttc
atgtttcctccaccctcgcccaagagtgtgcgaggggaggcagggatgcaggagtccctg
actgaggccaatcggtcgttcaagagggcagatggcatccggatgggcgatctctatgct
aacttgccatctggttcaaagattaaggacagtagggatgaatctggcaggttctctggt
gtcttctcttctagtggttcaccacgactcgggttctcaagaagttcaagcagattgtct
atgcaggatgatactgatgacgcggattttcctttcgctgttgatgatgttgatccagat
tcccgaccagggagtagcagtgggaaggacgtcggggatcaggcaggttcctcatcccat
aaatcacaagacgctgctgtcggttatcttgtccacctgctaaagtctgcacgtccactg
cgagattctagctactcaactcatacatcaagggccgaatctattgaagctggaagcaca
agctccttcatgtcccgcaggacatctgacgcacttgaggagctcgaatctttcagagaa
ataaaggagaacctgctagcacgtagtagatctaggctgcaggattcattggataaaccc
tag
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integrated database retrieval system