Setaria viridis (green foxtail): 117864403
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Entry
117864403 CDS
T07951
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svs03009
]
117864403
Enzymes [BR:
svs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117864403
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
Pre-60S particles
Helicases
117864403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
117864403
NCBI-ProteinID:
XP_034604398
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All DBs
Position
7:complement(23783151..23790514)
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AA seq
834 aa
AA seq
DB search
MAEPPEQASSEPTTPPQEDNQSTKTNNKKNRGTKKSKRAGASSLCSSTMVEDPFFVLAGG
KEGGFLELEEIDEADFGIVGGYVEEVGADEGKAGKDRGKKKKKKRKRKRGGDDQVLSGDG
DSFLKQCDGDSVVENEQEGEKEKKNAKGKRDRKKRKVKDSEKSGESGKDIADDDNAEDVQ
DKNENMEQDKDDDLILGEDDVFAWHELRLHPLLVKAMRRLGFKEPTPIQKSSFPAAAHQG
KDVIGAAETGSGKTLAFGLPILQRLLEEREKASRLHQEDEKMEESAGESPLRALILTPTR
ELAQQVCDHLKEAAKFLGIGVIPIVGGISMEKQERLLKNKPEIVVGTPGRLWELMSMNNQ
HLVELHSLSFFVLDEADRMIERGHFHELQSIIEMLPLTNGSDEQAARTMPNCETVPILQI
KKRQTFVFSATLALSSNFRKKLKRGLSTSKASTDDVSSIEALSKKAGMKPNAEIVDLTKA
SILPEKLEESFIECSEEDKDAYLYYILSVHGQGRAIIFCTSIAALRHISSILRILGINAL
TNHAQMQQRARMKAVDRFRGSENSILVATDGFARGMDFDDVRTVIHYQLPHSTDVYIHRS
GRTARKSLAGCSIALISSADKSKFYSLCKSLSKENLQQFPIDHAYMPAVMNRLSLARQID
KITRKNSQENANKSWLQRNAESMGLILETSDSEEERVKGHKQRKATSAHLQKLQQELSDL
LQRPLQPKTFSRRYLAGAGISPLLQKQLEELAKRKVSNNRSKTENKGSRFVVIGQDRVEP
LQALQNSGQEVCVNLDKQREKRRLAQNWKQKKHEEKKRSREQKRKEKRKAKAMD
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggccgagccgccggagcaggcgtcatcggaacccaccactccgccgcaggaagacaac
caaagcaccaagacaaataacaagaagaatcgcggcacgaagaaatcgaagcgagccggc
gcctcctcgctgtgctccagcaccatggttgaggacccgttcttcgtcctcgccggcggc
aaggaaggagggttcctggagttggaggagatcgacgaggcggacttcgggattgttggg
ggatacgtggaggaagtgggagcagatgaggggaaggctggcaaggatcgggggaagaag
aagaagaagaagaggaagcggaagcgtgggggtgatgaccaggtcttgagtggcgatggc
gattcttttttgaaacaatgcgatggcgattcagtagttgagaatgagcaggagggggag
aaagagaagaagaatgcgaagggaaagagggacaggaagaagaggaaggtgaaggatagt
gagaagagtggggagagcggcaaggacatagctgatgacgacaatgcagaagacgtgcaa
gataaaaatgagaacatggaacaagataaggatgatgatcttattttgggtgaggatgat
gtttttgcatggcacgaacttaggcttcaccctctgcttgtcaaggcaatgcgcaggctt
ggattcaaagaaccaacccctatacaaaagtcgtcctttcctgctgcagctcaccaaggc
aaggatgttattggtgcagccgagacaggttctggaaagacgcttgcctttggcctccct
attttgcaacgtctccttgaggagcgagaaaaggcctcaagattacaccaggaagacgaa
aaaatggaggaaagtgctggggaaagccctcttcgtgctcttattttgacacccaccagg
gagcttgctcaacaggtatgcgatcatctaaaagaagcagccaagttcttaggaattggt
gtcattcctattgttggtggtatatccatggaaaagcaagaacggcttttgaaaaacaag
cctgaaattgttgttggaactcccggaagattgtgggagctcatgtcgatgaacaatcaa
cacctagttgagctgcattcattgtcattcttcgtgttggatgaggctgatagaatgatc
gaacgaggccatttccacgaattacaatctatcattgagatgctcccgctgactaatggt
tctgatgaacaagctgcaagaacaatgccaaactgtgagactgtgccgatcttgcaaata
aagaagaggcaaacctttgttttctcagccacacttgcactttcatctaatttccggaag
aagctgaagcgtggcttatctacttcaaaggcgtcgactgatgatgtaagctctattgaa
gcactgtcgaagaaggctggaatgaaaccaaatgcagaaatagttgatctgacaaaggct
tcaatcttgcctgagaaacttgaagaatcttttattgagtgcagtgaagaggataaggat
gcctatctgtattatatactgagtgttcatgggcaaggtcgagcaataattttttgtaca
tcaatcgctgcattacgccacatttcctccatattgcgcattcttggtattaatgccttg
acaaaccatgctcaaatgcaacaaagggctcgcatgaaggccgtggatcgtttccgtgga
agtgagaattccattttggtcgcaactgatggatttgcaaggggtatggattttgatgat
gtgcgaacagttatccattaccagttgccacattcaactgatgtttatatccacagaagt
ggaaggacagcacgcaaatcattggctggctgcagcattgcattaatctcttctgctgac
aagtcgaagttttactctctttgtaagtcattgtcaaaggagaacctccagcaatttcct
atagatcatgcttacatgcctgcagtaatgaataggctctcgcttgctcggcagattgac
aagattacacgcaaaaattcacaggaaaatgctaacaaatcctggcttcagaggaatgct
gaatccatgggattgatattggagaccagtgacagtgaagaagaacgtgtaaagggccac
aagcaacgaaaggcaacttctgcacatctccaaaagcttcaacaggaattgagtgatctt
ttgcaacgcccgttgcagcctaagactttttcacgacgctatttggctggggctggaatt
tcaccattacttcagaagcaactagaagagttggccaagagaaaagtaagcaacaataga
agcaagactgagaataaagggtctcgatttgttgttattgggcaggatcgtgtcgaaccc
ttacaagcacttcagaattctgggcaagaggtctgtgtcaacttagacaaacaaagagaa
aagcgaagacttgctcagaactggaagcaaaagaagcatgaagaaaagaaacgttcgcgg
gagcagaagagaaaggagaaaagaaaagctaaagcgatggactaa
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