Setaria viridis (green foxtail): 117864408
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Entry
117864408 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K14856
protein SDA1
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svs03009
]
117864408
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117864408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_dom
SDA1_C
Motif
Other DBs
NCBI-GeneID:
117864408
NCBI-ProteinID:
XP_034604401
LinkDB
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Position
7:29895200..29900451
Genome browser
AA seq
838 aa
AA seq
DB search
MPRKHAPAFTPEAASASASTGAGQPHNLPVLQAKMKRDPEGYEEELRQLHRHFESSVFLF
QQQAALATTSSSGGGGEVAKELGDLALFLAHVAPFYPDDLADLPDQIGGLLDTNARGLPP
GLRAHLVQALILLVNRKIVDLEDTVELFVELQVIGDRAVKKLAFSHIVHSIRRMNQKHKN
DTRNRKLQNILFKFLQAEEESRAKRAFTILCDLHRRRVWFDERTTNAICDACFHPSSRIM
IAAISFLLGYENAEQEDDSDASSSEDEADKNPQVLLSKQDVYKANHKGTAASKKKKKAKL
QRVIRSMKRQQRKSVEDAGSSYYSPLTYLKDAQGFAEKLFSRLQKCNERFEVRMMMLKVI
ARTVGLHHLVLLNFYPYLQRYVQPHQRDVTTLLAAAVQACHDMVPPDAVEPLFKQIVNQF
VHDRSRPEAIAVGLNVVREICMRMPLMMNEDLLQDLVLYKKSHEKAVSIAARSLITLFRE
ICPSLLVKKDRGRPVDPKARPKAFGEVTVASDVPGAELLDENISSEGEDSDDESDAFDSD
DETVMPSAPPGTEENIGGSSDANKLDAVEDTKEDDEASDEDGTNEGQDNSDNDSDEIDEE
LDDDSDMDADTDMSDEDNDDDDELKESINGSEDEVSDQDEDSDEEDESNGSGSKVQKRKL
SDYIGELNTADASLRALKKLAGAKNAQVSSDETGKILSDEDFKRIKELKAKKEAKLALAQ
HGLIKGVDTKSATFKMPSSDQLSRKRVDPLQLEAHVRRKMSKEERLAMVKAGREDRGQYV
ARAAVKQKKTGGLSNKQKQHKKRMPLAATRAKAARSRQEKKQQRKRSGNQFRGRKAWK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcaagcacgcgccagcgttcacgccggaggcggcctccgcctccgcgtccacc
ggggctggccagcctcataacctcccggtgcttcaggcgaagatgaagcgcgacccggag
ggctacgaggaggagctccgccagctccatcgccacttcgagtcctcggtgttcctcttc
cagcagcaggcggcgctggccaccacctcctcctcgggcggcggcggggaggtggcgaag
gagctcggcgacctggccctgttcctcgcccacgtcgcgccgttctaccctgatgacctt
gccgacttgcccgaccagattgggggtttgctcgacaccaacgcgcgcgggctgccgccg
gggctccgggcgcacctcgtgcaggcgctaatacttctggtgaatcgaaagattgttgat
cttgaggacacagtggagttattcgtggagcttcaggttattggagatcgagctgtgaaa
aagctagcattttcgcatattgtacacagtatcaggaggatgaatcagaaacataagaat
gataccaggaatcgtaaattgcagaacatcctttttaaattcttacaggctgaagaagag
tcgcgggcaaagagggcatttactatcctgtgtgatcttcaccgtcggagggtctggttt
gatgaacgcacaacaaatgcaatatgcgatgcttgtttccatccttcttctaggattatg
atagctgctatttcattccttcttggatatgaaaatgctgaacaagaggatgacagtgat
gcttcaagcagtgaagatgaagcagataaaaacccacaagttcttcttagcaaacaggat
gtttataaggcaaatcacaagggtacagctgctagtaagaaaaagaagaaagctaaatta
caacgtgttattcgtagcatgaaaaggcaacagcggaaatctgttgaggatgctggttcc
agctactattcacccctgacgtatttaaaggatgcccagggttttgctgagaagcttttt
tctcggctgcagaaatgcaatgaacgttttgaggtaagaatgatgatgttaaaagttatt
gcgaggactgttgggctgcatcacttggttttgttgaacttctacccatatcttcaaaga
tatgttcaacctcatcaacgagatgtgacaactctacttgctgcagcagttcaggcttgc
catgatatggtacctccggatgctgttgaaccactgttcaagcagatagtaaatcagttt
gtgcatgaccgatctcgaccagaggctattgctgttggcttgaatgtcgtgagagagatc
tgcatgaggatgcctttgatgatgaatgaggatctgcttcaagacctcgttttatacaaa
aagtcccatgagaaagctgtttccattgctgctcgttcgctgatcactttgttcagagag
atctgcccttcattgttagtcaagaaagatcgtggccgtcctgttgatccaaaggctcgg
cccaaagcatttggtgaagtcactgtcgctagcgatgtgcctggtgctgagttgctagat
gaaaacatttcatcagaaggggaagactcagacgatgagtctgatgcttttgattctgat
gatgagacagtcatgccatctgcccctcctggaacagaagaaaatatagggggttcttct
gatgcaaacaaacttgatgccgttgaagataccaaagaggatgatgaagcatctgatgaa
gatggtacaaatgagggtcaagataactctgacaatgatagtgatgaaattgatgaagaa
ctagatgatgactctgatatggatgctgatactgatatgtctgatgaggataatgatgat
gatgatgaacttaaggaaagcataaatggttcagaggatgaagtttcagaccaggacgaa
gacagtgatgaggaagatgagtctaatggcagtggctctaaggtgcagaagaggaagttg
agtgattatattggtgagctaaatactgctgatgcaagccttcgtgcgctgaagaagtta
gcaggagccaagaatgctcaagtttcatcagatgaaactggtaaaattttatcggatgaa
gattttaagcgcatcaaagagctcaaggcaaagaaagaagcaaagctggctttggctcaa
catggactaatcaagggtgttgacacgaaatctgcaacctttaagatgccgtcttctgac
cagctcagtaggaagcgtgttgatccacttcagcttgaggctcacgtcagaagaaagatg
tcaaaagaggaaagactagcgatggtgaaagctggaagagaggatagagggcagtacgta
gcgagggcagctgtgaaacagaaaaagactggtggactgagcaataagcagaagcaacac
aagaagaggatgcctctggctgcaactagagccaaggcagcacgttctcggcaggagaag
aagcagcagcgcaagcgctccgggaatcagttcaggggccgcaaggcctggaaatga
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