Setaria viridis (green foxtail): 117864446
Help
Entry
117864446 CDS
T07951
Name
(RefSeq) SWI/SNF complex subunit SWI3C homolog
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117864446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svs03021
]
117864446
03036 Chromosome and associated proteins [BR:
svs03036
]
117864446
Transcription machinery [BR:
svs03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117864446
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117864446
PBAF complex
117864446
GBAF(ncBAF) complex
117864446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
DUF4428
ZZ
Motif
Other DBs
NCBI-GeneID:
117864446
NCBI-ProteinID:
XP_034604446
LinkDB
All DBs
Position
7:complement(32252606..32259794)
Genome browser
AA seq
780 aa
AA seq
DB search
MPRKASSNSDARAKWRKRKRAAASPSPSKQQADHSDDSDSAAAANGDEDATRGAFANGGG
GTLAAGGGGDDDPVLDLRGAEVLSSPAEPVSVFPAAVRRAVGRPHPSVLAVIDAERAAAG
ADGAPAAVATVPFLENISHGQLQVISAMLPDHPSLSYDPDKPSTYVCTPPPLMEGCGVHK
QFYGKLHIVPRHSDWFVPTTVHRLERQVVPQYFSGKSQGQTPEKYMMLRNRVIAKYLERP
GKRLVFAECQGLVTSTPELYDLSRIVRFLESWGIINYLATGSVHRGLRMAASLIKEETTG
ELHLVSAPMKSIDGLILFDRPKCSIRADDIASAVSTSSAPVVANGDANSANLDDKIWERL
SETSCSFCSQPLPSLHYESQKEADIALCSDCFHNSRFVTGHSSLDFQRVDGMKDRSDTDG
DRWTDQETLLLLEGIEKYNDNWNHIAGHVGTKSKAQCIQHFICLPVEDGLLENIEVPEAS
LPSRMQSNGFLNSDSNGSTSGCLPQSSQPGNQIPFINSANPVMSLVAFLASEVGPRVAAA
CASAALSVLTRDDSRMCSEGIDGVGHAAHLNYGPSSSISPETVKHAAMCGLSAAATKSKL
FADQEEREIQRLAATIINHQLKRLELKLKQFAEVETMLLKESERFELTRQQLAAQRVRIL
STRLPSSGGTLPGGGSTMVSNPMNQAAGLRPPMMQGSMPQSSMPAMYANHMQGHPQMAAL
LQQRQQMLSFGPRLPLSAIHPGTSSSSAPSMMFNPGMPNSSAPNHHPLLRPPSGNNSNVG
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcaaggcctcctccaactcagatgcgcgggccaagtggaggaagcggaagcgc
gccgccgccagcccttccccgtccaagcagcaggccgaccactccgacgattccgactcc
gccgcggccgcgaacggcgacgaggacgcgactcgcggcgcctttgccaacgggggcgga
ggaaccctagctgccggcggcggcggcgatgacgaccccgtgctcgacctccgcggggcg
gaggtgctttcctctcctgccgagccggtctccgttttccccgccgccgtccgccgcgcc
gtcggccggcctcacccctcggtgcttgctgtcatcgacgcggagcgcgcggcggctggt
gccgacggtgctccggccgccgtagccacggtaccctttctcgagaacatttcgcacggt
cagctccaggtgatctcggcgatgctgcctgaccatccgtccctgtcctacgaccctgac
aagccgtccacgtatgtctgcaccccgcctccactcatggagggatgtggagtgcacaag
cagttctacggcaaacttcacatcgtgcccaggcactcagattggttcgtgccaacaacg
gtgcacaggttggagaggcaggttgtgccacaatacttctctggaaaatcccaggggcaa
acaccggagaagtacatgatgttgaggaatagggtgattgcgaagtatttggaacgacct
gggaaaagactcgtgtttgccgagtgccagggacttgtcacaagcacacctgaattgtat
gatctgagtaggatagttaggttcttggaatcttgggggatcattaattaccttgcaaca
gggtctgtgcaccgtggcctcaggatggcagcatcactaatcaaggaggagacaacaggg
gagctgcatctggtatctgcacctatgaaatcgattgatggtttgattctgtttgatcgg
ccaaaatgcagtatccgggcagatgatatagcttctgcggtgtcaacttcatctgctcca
gtggtggcaaatggtgatgctaattctgcgaatttggatgataagatatgggagcgctta
tcagagacttcttgtagtttctgctcacaacctttgcccagcttacactacgagtcacaa
aaggaggcagacattgctctttgttcggattgcttccacaattcaagatttgttactggg
cattcaagtttagattttcagagagtggatgggatgaaggatcgatcagacactgatggg
gacagatggactgatcaggaaactttactgttgttagaaggcatagagaagtacaatgat
aactggaatcatattgcggggcatgttggaacaaagtcaaaagcacaatgtattcaacat
tttatttgtctcccagtggaagatggtttgttagagaacattgaagtgccagaagcatcc
cttccatccaggatgcaaagcaatggatttttgaattcagattccaatggcagtacttca
ggttgtttacctcaaagtagccaacctggaaaccaaattccattcattaattctgctaat
ccagtcatgtcactggttgcatttttggcctctgaagtaggaccaagggttgcagcagcc
tgtgcaagtgcagcgttatcggttttgacaagagatgattccaggatgtgttcagaaggc
atcgatggtgtgggtcatgctgctcatctaaattatggaccctcatcatccatctctcct
gaaactgtcaaacatgctgccatgtgtggcttgtcagcagcggcaacaaagtccaaactt
tttgcagatcaggaggagcgcgaaattcagagattagctgctaccatcataaatcatcag
ctaaagagactggagttgaagctgaagcagtttgcggaggttgagaccatgctcttgaag
gaaagtgaacggtttgagctgacgaggcagcagctggcagctcagcgcgtccgaatatta
tctacccggttaccttcctcaggtggcactctacccggaggtggcagcaccatggtttca
aacccaatgaatcaggctgctggtcttagaccgccgatgatgcagggctcaatgccgcag
tccagcatgccagcgatgtacgccaaccacatgcaggggcatccccagatggctgctctg
ctgcagcagcgtcaacagatgctctcgttcgggcctcgcctgccgctctcagcaatccac
cctggcacatcatcctcgtcggcacccagtatgatgttcaaccctggtatgcccaactcg
tcggctcctaatcaccacccgctgttgagaccaccttcagggaacaattcaaatgtaggt
taa
DBGET
integrated database retrieval system
