Setaria viridis (green foxtail): 117864484
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Entry
117864484 CDS
T07951
Name
(RefSeq) 3-ketoacyl-CoA synthase 5
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00062
Fatty acid elongation
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
svs04626
Plant-pathogen interaction
Module
svs_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
117864484
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
117864484
Enzymes [BR:
svs01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
117864484
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GFIT
Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
Chal_sti_synt_N
Motif
Other DBs
NCBI-GeneID:
117864484
NCBI-ProteinID:
XP_034604536
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Position
1:36587263..36589369
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AA seq
484 aa
AA seq
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MVSSAQLRRLKPLYQLVVNNILAIVAVPFAAAAVLKAAELGPGEILARLRALRPAHMFLA
AFLPAAAAALYLRLRPRAVYLVDYACFRTNPNCRVPFATFLEHSRVWPGFDERSVRFMTR
LLERSGLGEETCLPYAQHYIPPSRDLESSRAEAELVIFSAIDDLLAKTGLSPQDIDILVV
NCSLFAPTPSFTDMIMRRYKLREDVRAVHLAGMGCSAGLISVELARNLLQVAPRGAHALV
VSTETITPNYYMGQERAMLLPNCLFRMGGAAALLSTNGANARFRLARVVRTLRGASDSAY
RCVYQEEDDRGNVGINLSKDLMNIAGDALKANITAMGPLVLPASEQLLFALSFIARKVLN
NRIKPYIPDFRTAFEHFCIHAGGRAVIDELQRSLTLSDEQVEASRMTLHRFGNTSSSSLW
YELAYIEAKGRMRRGDRVWMIGFGSGFKCNSAAWECIRPAANADGPWANCIHRYPVHIPD
VLKH
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggtctcctcggcgcagctcaggcggctcaagcccctgtaccagctggtggtgaacaac
atcctggccatcgtcgcggtgccgttcgccgccgcggccgtgctcaaggcggcggagctg
ggtcccggcgagatcctggcgcgcctccgcgcgctccggcccgcgcacatgttcctcgcc
gcgttcctgccggcggcggcggcggcgctgtacctcaggctccgcccgcgcgcggtgtac
ctggtggactacgcgtgcttccgcaccaaccccaactgccgcgtcccgttcgcgacgttc
ctggagcactcccgcgtgtggccgggcttcgacgagcgcagcgtccggttcatgacgcgg
ctgctggagcgctcggggctgggtgaggagacgtgcctgccgtacgcgcagcactacatc
ccgccgtcccgggacctcgagtcctcccgcgccgaggccgagctcgtcatcttctccgcc
atcgacgacctcctcgccaagaccgggctgtccccgcaggacatcgacatcctcgtcgtc
aactgcagcctcttcgcgccgacgccgtccttcaccgacatgatcatgcgccggtacaag
ctccgcgaggacgtgcgcgccgtgcacctcgccgggatggggtgcagcgcggggctcatc
tccgtggagctcgcccggaacctgctccaggtggcgccccggggcgcgcacgcgctagtg
gtgtccacggagaccatcacccccaactactacatggggcaggagcgcgcgatgctgctc
cccaactgcctcttccgcatgggcggcgcggcggcgctgctctccaccaacggcgccaac
gcgcggttccggctggcgcgcgtggtgcgcacgctccgcggcgcctcggacagcgcctac
cggtgcgtgtaccaggaggaggacgaccggggcaacgtcgggatcaacctgtccaaggac
ctgatgaacatcgccggcgacgcgctgaaggcgaacatcacggcgatgggtcccctggtg
ctgccggcgtcggagcagctgctgttcgcgctgtccttcatcgcgcggaaggtgctcaac
aaccggatcaagccctacatcccggacttccgcacggcgttcgagcacttctgcatccac
gcggggggccgcgccgtgatcgacgagctgcagcgcagcctgacgctgtcggacgagcag
gtggaggcgtcgaggatgacgctgcaccggttcgggaacacctccagcagctcgctctgg
tacgagctcgcctacatcgaggccaagggccggatgcgcaggggcgaccgcgtctggatg
atcggcttcggctccgggttcaagtgcaacagcgccgcctgggagtgcattcgccccgcc
gccaacgccgacgggccatgggcaaactgcatccaccggtaccccgtccacatccccgac
gtgctcaagcactga
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