KEGG   Setaria viridis (green foxtail): 117864507
Entry
117864507         CDS       T07951                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    117864507
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:svs03019]
    117864507
Messenger RNA biogenesis [BR:svs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     117864507
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     117864507
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 117864507
NCBI-ProteinID: XP_034604529
LinkDB
Position
7:20326882..20331122
AA seq 128 aa
MSWAGPDEILLSTSLAGFLDKKLIVLLRDGRKLLGTLCSFDQFANVVLQGACERVIVGEQ
YCDVPLGLYVIRGENVVLIGELDREKDELPAHMTCVSEAEIRKAEKAEREARDLKGTMRK
RMEFLDFD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcgtgggccgggcccgacgagatcctcctctccacctccctcgccggcttcttggac
aagaagcttattgtcctgcttagagatggacggaaactgcttggcaccctgtgctcgttt
gatcagtttgcaaatgttgttcttcagggtgcttgtgaacgagtaattgttggggagcaa
tattgtgatgttcctcttggtctgtatgtgatccggggagagaatgttgttttaatcgga
gaattggaccgcgaaaaggatgaactccctgctcacatgacatgtgtttccgaagcagaa
attagaaaggccgagaaggcggaaagggaagcaagagacctgaaaggcacgatgaggaaa
cggatggagttcctagacttcgattag

DBGET integrated database retrieval system