Setaria viridis (green foxtail): 117864621
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Entry
117864621 CDS
T07951
Name
(RefSeq) ribonuclease TUDOR 2
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
svs
Setaria viridis (green foxtail)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Agenet
SDH_C
Motif
Other DBs
NCBI-GeneID:
117864621
NCBI-ProteinID:
XP_034604639
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Position
7:14016772..14022716
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AA seq
1097 aa
AA seq
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MAASGWLRGKVKAVPSGDTLVIMSIAKADTIPLEKSITLSCIIAPRLARRHGTDEPFAWE
SREFLRKLCIGQEIKFKIDYVLPGSSREFGTVYLGGDKNIAGLVVAQGFAKVKEQGHKGH
VSPYVTDLLRLEEVAKDQGLGRWSKEHGAAEASVRILPSSTMGEAGPSDVKGFISEMKGK
ALEAIVEQVRDGSTIRVCLIPSFHFFQVYVAGVQAPSMGRRTSIPSAVAQTEVTNNVDVN
GKASEEAQAPLLGTLQKAVASAVTYSEIPPDRFGKEAKHFTETKVLNREVRVILEGTDSF
DNMFASVYYSDGNTAKDLALELVENGLAKYMEWSANMLGAETKRKLKNAELQAKKEQLRI
WTGFQPPVTNTTPIHNQKFTGKVIEVVNGYCIVIADDMVLVGSPLAERRVNISSIRPPKL
VDSSGESKTIEHFARAAKEFLRTRLIGKQVHVSMEYSRRINISNGHAADKTNIVDTRVLD
YGSVFLPSQSGSPGNLFGANVAELLLSRGFADITRHRDYEERSHHYDALLAAYSRAEKAK
KGYHAKKYYPATHMNDLTTVPAKKARDFFHLLQRNKRHSAVVEYIFSGHRFKLTIPNETS
TITFSFSCVRCPGKNEPYSDDAIALMRRTILQHDVEIEIEAVDRTGTFLGSLWESKNNMA
YVLLEAGLAKLSSFGLDRISDAQTLIRAEKSAQQKKLKVWENYNEAKVIPHGSLMGQNGK
ESFKIVVTEVIGGGKFYAHIVGDRRLDSIQQQLASMKFNDIPETLMVAKDFPDTLSNTLE
VQDRPRHCPSNTSEVQAEPKNHVVPLPSRWSSLFKDKVDTLKDEVPLDTSKAEDLSSNGP
SDAVPFNPTKGDVVLAQFTLDNSWNRAMIVSEHQGPMEREFLVFYIDYGNQEIVTYSRLR
PAHANQSTSLIPPLAKLFRLAFIAVPNLKDNLGEQAARYLSMVLLDNGKEFKATIEERAT
VESKQEGQGTGEVLVVTLFDEDAESSINAAMLENGLAQIETHRLISRERRAAVKNLEEFQ
EHAKKERRGIWRLEGVGVPDKSAKDSNACDINDDEDLLAPARAQPPSRGFDLIDLIASKS
TGTPKPSREHVMGDSLP
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtcgggctggctgagggggaaggttaaggccgtgccctccggcgacaccctg
gtaatcatgtcgatcgcaaaggctgatacgatcccactggaaaagtcgatcaccttgtca
tgcatcatcgctccgaggctggcacggcgtcatggaacggacgagccgtttgcctgggaa
agtagagaatttctgagaaagctttgcattggacaggaaattaaatttaagatcgactat
gtacttcctggatcaagccgtgaatttggcacggtctatcttggtggtgacaaaaatatc
gcaggcctggtagttgcccaggggttcgccaaggtaaaagaacaaggtcataagggtcat
gtgagtccatatgtcactgatttgctaagattggaggaggttgctaaagaccaaggttta
ggtcgttggagtaaggaacatggcgctgcggaggcttcagtaagaattcttccatcatcg
accatgggagaagccggcccttctgatgtgaagggttttatttctgagatgaaagggaaa
gctttggaggccattgttgagcaagtgcgtgatggtagcactatccgtgtctgcttgatc
cctagctttcatttttttcaggtttacgttgctggtgttcaggctccatccatgggaaga
cgaacatctattccaagtgcagttgctcaaacagaagtaactaacaatgttgatgtgaac
ggtaaagcatctgaagaagctcaagcaccactactgggtacattacagaaggctgtagca
tctgcagttacttattctgaaattccaccagataggtttggtaaggaggccaagcacttc
actgagacaaaagttctaaatagagaagtgcgggttatactggagggaacagacagtttt
gataacatgtttgcttcagtgtattattctgatggaaatactgccaaggacttggcgctt
gagcttgtagaaaatgggttggcaaagtatatggaatggagcgcaaacatgcttggagct
gaaaccaaaagaaagcttaagaatgccgaacttcaggctaagaaggaacagctaaggata
tggacgggatttcagccacctgttacaaatacaacaccaatacacaatcagaaattcaca
ggaaaagtcatagaggtggtgaatggttactgtatagttattgctgatgatatggtgctt
gttggaagtcctttggcagagcgccgtgtaaatatttcgagcatcagacctcctaagttg
gttgattcttctggagaaagcaaaactattgaacattttgctcgtgcagctaaggaattc
ttgcgtacacggctaattggcaaacaggttcatgtctcaatggagtattctaggagaatc
aatatttcaaatggacatgctgcagataaaaccaacatagttgacaccagagttttggat
tatggatccgtttttctaccctcccagagtggtagccccggcaacctatttggagccaat
gtcgctgagctcttgctttcacgaggatttgctgatatcacaagacatcgagactatgag
gagaggtcacaccactatgatgcactattggcagcatattcgcgtgctgaaaaagcaaag
aaaggatatcatgctaaaaagtattatcctgcgactcatatgaatgatttgacaacagtt
cctgcaaagaaggctagagattttttccacttgttacaacgaaacaaaaggcattccgct
gttgttgagtacatttttagtgggcatcgcttcaaactaacaatacctaatgagacaagc
accattaccttttcattctcctgtgttcggtgccctggtaaaaatgagccctactcggat
gatgccattgctctaatgaggagaacgatactccaacatgatgttgagattgagattgaa
gctgtggataggaccgggacattcttaggttccttatgggagtccaaaaacaatatggct
tatgttcttcttgaagccggcctagccaagcttagttcatttggacttgatagaatctca
gatgctcaaaccctcataagggcagaaaaatccgcacaacagaagaaattgaaggtgtgg
gagaactacaatgaagcaaaagtgattccccatggatcgttgatgggacaaaatggaaaa
gaatctttcaagattgtcgtaactgaagtcattggtggtggaaagttctatgcccatata
gttggtgatcgtcgcttggacagcattcaacaacagcttgcttctatgaaatttaatgat
ataccagaaactttgatggttgctaaagatttcccagatactttatcaaataccttggaa
gttcaagatcgaccaaggcattgtccatcgaacacatcagaagttcaagctgagccaaag
aatcatgtggttcctcttccttctaggtggtctagtttgtttaaagacaaagtagatact
ttgaaagatgaagttccattagatacttcgaaagctgaagatttgtcatctaatggtcca
tctgatgctgttccatttaatccaaccaagggagatgtggtactagcccaattcactctc
gacaattcatggaatagagctatgattgtgagtgaacatcaaggacccatggagagggag
tttctagtattttatatagactatggaaaccaagaaatagttacttacagtcgcttgaga
cctgcacatgcaaatcaatctacttccttgattccaccacttgcgaagttattccgtctt
gcattcatcgcagttcctaacctaaaagataaccttggtgaacaagctgcaaggtatcta
agcatggttttgcttgataatgggaaagagttcaaagcaacaattgaagagcgtgccact
gtggaatctaagcaagaaggacaaggtactggagaagtacttgttgtgactttgtttgat
gaggatgctgagagcagcatcaatgctgcaatgctggagaatggcttggctcaaatcgag
acacatagattgatctcacgggagcgtagggctgctgtgaaaaatctagaagagttccag
gagcatgcaaagaaggagcgtcgtggcatttggcgtcttgagggtgtgggtgtgccagat
aaatctgcaaaagacagcaatgcatgtgacatcaatgatgatgaggatctgctagcgcca
gctcgagctcagcctcctagcaggggctttgacctcatcgatctcattgcttccaagtcc
accggaactccgaaacctagtagggaacacgtcatgggcgattcattgccttaa
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