Setaria viridis (green foxtail): 117864645
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Entry
117864645 CDS
T07951
Name
(RefSeq) homeobox-leucine zipper protein ROC6
KO
K09338
homeobox-leucine zipper protein
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117864645
Transcription factors [BR:
svs03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
117864645
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
GNAT_acetyltr_2
CEP89
DivIC
Motif
Other DBs
NCBI-GeneID:
117864645
NCBI-ProteinID:
XP_034604660
LinkDB
All DBs
Position
7:complement(15291813..15295744)
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AA seq
751 aa
AA seq
DB search
MENDGHLNNNKEQALGLTLGDATAWDYPVEYDMDALLGEDHNVDTNQRTHDEDHLPESET
PQSKRPKRFNVRQVQELEAMFHACTHPDAEQRQQLGTRIGLEERQVRFWFQNRRSLMKLK
ACGNEVKELQQENGKLQADNNELKQLMLDPTCFKCRDPAGANQTTLERQRLLSENARLKD
ELQRANAYLKRSIREAGRRPQPMSSENQASAYMNPVPFTCNRTNQATLRSHAERAFKELV
MLATKGQPLWMPTIDGEVLSDQQYDLQTFPGLLGFCPWGFVAEATRETDMIKGEAMDLVS
ILTDVAQWSEMFPDIVSYVRSSNVICSGSSSLRDGLIQLMDVEFWVPTPCLPTRNVKFLR
FSKMMAERKWAVVDVSVDGNQHGFQQQSSGASCTGYRLLPSGCILEGMRSGFCKVTWVVH
GEYLGAAVPTLFRKFLHSGQAFGACRWLRSFQRQCEYMAVLASSHVPSSSSSSSGAAISS
LGKRGVLELAQRMTASFYAAISGPVTIASTNITNQWCVSSGTAAERVDAAVRMVIWNCAE
IMPGEPAITVLSATTTVRLPGTPPVRVFEYLCNLQRRGEWDSFVNGGQVKELGYVSTSAR
LHGNAVSVLRPTIVAQGSRGMNNNMLILQQSSTDASGSLVVYSLIEENVMRGIMAGAENN
IFLVPSGFAILPDGHGKARYNAASSSTSAPIDNNNDDGEGALLTVAFQAMLPSSPSGDHA
TTRAFDNAGQQLCDAIKKIKDAVGANNVIVD
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgatgggcatctgaacaacaacaaggaacaagctcttggcctcaccttggga
gacgctacagcatgggactaccctgtggaatatgatatggatgctctcctaggagaggac
cataatgtggacactaaccagagaactcatgacgaggaccacctccctgagagtgagaca
ccgcaatccaagcgtccgaagcgcttcaatgtgcggcaggttcaggaactcgaagcgatg
ttccacgcatgtacccacccagatgctgaacagcgtcagcaacttggcacaaggattggt
ttagaggaaaggcaggtccgattctggttccaaaaccggcgctccttgatgaagttgaag
gcatgtggaaacgaggtcaaggagttgcaacaagaaaatgggaagctgcaagctgataac
aatgaactgaagcaactaatgctggacccgacatgcttcaaatgtcgtgaccccgcagga
gcaaaccagacgacgttggagaggcagcgcctgctcagtgaaaatgcaaggctcaaggat
gaactgcagcgtgccaatgcttacctgaaaagaagcatccgtgaggcaggacgacgtcct
cagcctatgtcatccgagaatcaggcatcagcttacatgaaccctgtgccattcacctgc
aatagaaccaaccaggctacacttcgatcgcacgctgagcgtgctttcaaggagcttgtc
atgttggcaacgaagggtcagccgttgtggatgccaaccatcgacggcgaggtgctcagc
gaccagcagtacgatttgcaaacgttccctgggttacttggattttgcccatgggggttt
gtcgcggaggctacaagggagactgatatgatcaaaggcgaagccatggacctcgtcagc
atcctcaccgatgtggcccagtggtcagagatgttccctgatatcgtctcatatgtgagg
tccagcaatgtcatctgcagcggcagttcctctttacgcgacgggctcattcaactgatg
gatgtagagttctgggtgccaacgccgtgcctgccgacccgcaacgtgaagtttctgagg
tttagcaagatgatggcggagaggaagtgggctgtggtagacgtgtctgttgatggcaac
cagcatggatttcaacagcaaagcagcggagctagttgcacgggctacaggttgctgcca
tccggctgcatacttgagggcatgaggagtggcttctgcaaggtcacgtgggttgtgcac
ggggagtaccttggagccgctgtgccaacactcttcagaaagtttctccattctgggcaa
gcctttggtgcatgccgttggctcagatcgttccagaggcagtgtgagtacatggccgtt
ctggcttccagccatgttccaagcagcagcagtagcagctcaggggcagccatatcatcg
ctggggaagaggggagtcttggagctggcccagcggatgacggcgagcttctacgccgcc
atctctgggccggttaccattgcatcgaccaacatcaccaaccagtggtgtgttagcagt
ggcactgctgctgagagggtggacgcagcagtgcgcatggtgatatggaattgcgctgag
atcatgcctggagagcctgcaatcacggtgctgagcgccaccaccacagtccggctgcct
ggcacaccgccagtgcgcgtgttcgagtacctctgcaatttgcagcgccgtggcgagtgg
gatagctttgtcaatgggggccaagtgaaggaattgggatatgtttccacgtctgcacgc
ctccatggcaacgctgtctctgtcctccgccccactatcgttgctcagggaagtcgtgga
atgaacaacaacatgctgatcttgcaacagtcaagcaccgacgcgtcaggttcgctggtg
gtgtacagtctcattgaggaaaacgtgatgcgtggcatcatggctggcgccgaaaacaac
atcttcctcgtgccctctggattcgccatcctcccagacggccatggcaaggcccgatac
aacgctgccagctcctctactagtgctcccatcgacaacaacaacgacgacggtgaagga
gcacttcttactgtggcgttccaagcaatgttgcctagctccccatcaggcgaccatgcc
actacccgggcctttgacaatgcaggacagcagctctgcgatgcgataaagaagatcaag
gacgccgtcggggccaataacgtcatagtggactga
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integrated database retrieval system
