Setaria viridis (green foxtail): 117864781
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Entry
117864781 CDS
T07951
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
svs03041
]
117864781
Spliceosome [BR:
svs03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
117864781
Other components
Complex C specific factors
117864781
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Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
G-patch
G-patch_2
DUF7742
Motif
Other DBs
NCBI-GeneID:
117864781
NCBI-ProteinID:
XP_034604767
LinkDB
All DBs
Position
7:23855031..23856854
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AA seq
607 aa
AA seq
DB search
MDADERRYATHGRDAGDNCRWARARWGTGGYSASAHRADVPGRYGADYGRPPQKRPHGSG
DLPKHVHFVSAADSAAVPSGDSRNPASSSSWDPARQATSPAPAPGSLASNTVVAKMMKRM
NYKEGTGLGRHGQGIVAPIEVIPRPKNAGLGTAEGSITGWADDEPPPSAENWPKWDEAGG
AKKRKRDLVFDVKILATPPEERAAEAVAWVHKALARASRWSSGGQGEPCYGEETLAAAIS
KAIARVQEASASGALTTGELIREFTALKEQCPREYTTYRLAIAAPLLRRAVFRQWEPLSD
PSRGQEAVLELKGTLLDDGSAASPYAALVDDVVVGPALASAAETWDARDPEPMVRFLETW
GDALPLPAIQRVLEQVVMPKLSAAVESWEPLWGPVPCHVWVRPWIPLLGRWLEPLYATVR
GKLGRELQGWHAARASADRDMVLPWKDAFGPAAWGEFVGGHVVPYLRRGLRAVRVTPPEQ
DDGGFRGMMRWAPSVVSASDMARLLEEEFFGKWQDALCRWLWAARPTVAEAMAWHERWKR
FLTPELLADERVRVPIEAGLEKISRAAQGLEIYRPPGRGQHAREVYSCRYRSRGRAGVGC
GRNRRQQ
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgacgagcggcgctacgcgacccacggccgcgatgccggcgacaactgccgc
tgggctagggcacggtggggaacgggcggatactccgcgtctgcccaccgcgccgatgtt
cccggtcgctacggcgccgactacggccgtccgccgcagaaacgaccacacggctccggc
gatctccccaagcacgtccatttcgtctccgcggccgactctgcggccgttccgtccgga
gattctcgtaatcccgcatcgtcgtcgtcttgggatccggctcggcaggccacgtcgccg
gcgccggcgcccgggagcctggcgtccaacacggtggtggcgaagatgatgaagcgcatg
aactacaaggaaggcacgggcctcggcaggcacggccaggggatcgtcgctcccatcgaa
gtgatcccgcggcccaagaacgctggcctcggcaccgccgagggatccatcaccggctgg
gcggacgacgagccgcctcccagcgcggagaactggcccaagtgggacgaagccggagga
gcaaagaaacggaagcgcgatctggtgttcgacgtgaagatcctcgccacaccgccggag
gagagggccgccgaggccgtcgcgtgggtgcacaaggcactcgcccgggcgtctcggtgg
tcgagcggcggccagggggaaccatgctacggggaggagacgttggcggcggcgatcagc
aaggccatcgcgcgggtgcaggaggcgagcgcgtcaggggcgctcacgacgggcgagctg
atccgcgagttcacggccttgaaggagcagtgcccccgggagtacacgacgtaccgcctc
gcgatcgcggcgccgctactgcggcgcgcggtgttccggcagtgggagccgctcagtgac
ccgtcgcgcgggcaggaggcggtgctcgagctcaagggcacgctgctagacgacgggtcg
gccgcgtcgccgtacgccgcgctggtcgacgacgttgttgtggggcccgcgctggcgtcg
gcggccgagacgtgggatgccagggacccggagccgatggtccggttcctggagacgtgg
ggggacgcgctgccgctgcctgccatccagcgcgtcctcgagcaggtggtcatgccgaag
ctgtcggccgccgtggagtcctgggagcccctgtgggggcccgtgccgtgccacgtctgg
gtgcgcccgtggatcccgctcctcgggcgctggctcgagccgctgtacgcgacggtgagg
ggcaagctcgggagggagctgcaggggtggcacgcggcccgggcctcggccgaccgcgac
atggtgctgccgtggaaggacgcgttcgggccggcggcgtggggggagttcgtcggcggc
cacgtcgtgccgtacctgagacggggcctgcgggcggtgcgcgtcacgccgccggagcag
gacgacggcgggttccgtgggatgatgaggtgggcgccgtccgtggtgtcggcgtcggac
atggcgcggctcctggaggaggagttcttcggcaagtggcaagacgcgctgtgccggtgg
ctgtgggcagcgagacccaccgtggcggaggccatggcgtggcacgaaaggtggaagcgg
ttcttgacgccggagctgctcgccgacgagcgcgtgcgtgtgcccatcgaggccggcctc
gaaaagattagccgcgcagcccaaggtctggagatttaccggccgccgggacgggggcag
cacgcccgcgaggtctactcttgccgctacagatcacgagggcgtgcgggcgttggttgt
ggacgtaataggcgccaacagtga
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