Setaria viridis (green foxtail): 117864825
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Entry
117864825 CDS
T07951
Name
(RefSeq) nuclear poly(A) polymerase 4
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117864825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117864825
Enzymes [BR:
svs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
117864825
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
117864825
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
SR-25
Motif
Other DBs
NCBI-GeneID:
117864825
NCBI-ProteinID:
XP_034604803
LinkDB
All DBs
Position
7:27733674..27735715
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AA seq
560 aa
AA seq
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MSMASSQPKQMFGEPISLVGPTAADLESTAELEKLLHEAGLYESPEESALREEVLRDLQA
IVDRWVKQLAFQHGYPDAMVEEANALLVPFGSYRLGVHGRGSDIDALVVGPSYADRDYDF
FVVLAGALAETEAVTQLQPVPGAHVPVMKLRFRGVQVDLVYANVDLVVVPRDLDLGDRSL
LRGVDGVTARSLNGVRVAAEILRLVPDAAAFRTTLRCVKHWAKARGVYSNVSGFLGGVAW
AVLVARVCQLYPNAAPSMLVPRFFKVLAQWRWPAPVMLRDIEHDAELGLPVWDARRNPRD
RAHLMPVITPAYPCMNCTYNVSPATQRVIWEQIQAGDAACREIAATAGRGWEALFRPFQF
FGAHKSYLQVDATVAGGEDELREWKGWVESRLRQLVAKVERDTYGELLCHQNPHAYDAEP
HGLHCTSSFFVGLSKPQQQQQPPPGQQPQFDLRATTEEFLQDVYTYGFWRPGLEVAVKHV
RRKDLPPYVMQKIRSPNNSHELKRKRGGDDGSSSSSPSLSSSSPSSGEDDSGRRPIRRAK
LGSCIQQSNSLPGIRFSSTA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtccatggcgtcctcccagccgaagcagatgttcggtgagcccatctctctggttggc
ccgacggcggccgacctcgagagcacggcggagctcgagaagctcctgcacgaggccggg
ctgtacgagagccccgaggagtcggcgctccgcgaggaggtgctgcgcgacctccaggcc
atcgtcgaccgctgggtgaagcagctcgccttccagcacgggtaccccgacgccatggtc
gaggaggccaacgccctgctggtccccttcggctcctaccgcctcggcgtccacggccgc
ggctccgacatcgacgccctcgtcgtcgggccttcctacgctgaccgcgactacgatttc
ttcgtcgtgctcgccggcgccctggcggagacggaggcggtgacgcagctgcagcccgtg
cccggcgcgcacgtccccgtcatgaagctccggttccgcggtgtgcaggtggacctcgtc
tacgccaacgtcgacctcgtcgtggtgccccgggacctggacctcggcgaccggtctctg
ctccgcggcgtcgacggcgtcaccgcccgcagcctcaacggcgtgcgcgtggccgcggag
atcctgcggctggtccccgacgccgccgcgttccgcacgacgctccggtgcgtgaagcac
tgggccaaggcgcgaggggtctactccaacgtctccggcttcctgggcggtgtcgcctgg
gccgtcctggtggcgcgcgtctgccagctctacccgaacgccgcgcccagcatgctggtg
ccgcgcttcttcaaggtgctcgcgcagtggaggtggccggcgccggtgatgctccgggac
atcgagcacgacgccgagctcgggctccccgtctgggacgcccgccggaacccgcgcgat
cgggcccacctcatgcccgtcatcacgccggcgtacccctgcatgaactgcacctacaac
gtatcgccggccacccagcgcgtcatctgggagcagatccaggccggcgacgccgcgtgc
cgggagatcgccgccaccgccggccgcggctgggaggcgctgttccggccgttccagttc
ttcggggcgcacaagagctacctgcaggtggacgccacggtggccggcggcgaggacgag
ctccgggagtggaaagggtgggtggagtcgcggctgcggcagctggtggccaaggtcgag
agggacacgtacggcgagctgctctgccaccagaacccgcacgcctatgacgcggagcct
cacggcctgcactgcacgtcgtctttcttcgtcggcttgtcgaagccacagcagcagcag
cagccgccgccagggcagcagccacagtttgatctccgggcgacgacggaggagttcttg
caggacgtgtacacgtacggcttctggaggcccggcctggaggtggccgtcaagcacgtc
cggcggaaggacctgccgccgtacgtgatgcagaagatccgtagtccgaataatagccat
gagctcaagaggaagcgcggcggcgatgacggatcttcctcgtcgtcgccatcgttgtct
tcgtcctccccatcctctggtgaggacgactccggccgaagaccgatcagacgggcgaag
ctcggaagctgcatccaacagagtaattctctccccggcattagatttagttctacagca
tag
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integrated database retrieval system
