Setaria viridis (green foxtail): 117864935
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Entry
117864935 CDS
T07951
Name
(RefSeq) protein HEAT STRESS TOLERANT DWD 1
KO
K14848
ribosome assembly protein RRB1
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svs03009
]
117864935
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117864935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WD40_Prp19
WD40
WDR55
Beta-prop_EML_2
Beta-prop_EIPR1
WD40_WDHD1_1st
CAF1C_H4-bd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Peptidase_C14
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_SCAP
EIF3I
WD40_MABP1-WDR62_2nd
NBCH_WD40
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
WD_LRWD1
Rrn6_beta-prop
DUF2880
Motif
Other DBs
NCBI-GeneID:
117864935
NCBI-ProteinID:
XP_034604893
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Position
7:complement(34216214..34221362)
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AA seq
695 aa
AA seq
DB search
MTKSKKTKKVEASSSSNPVVASGPAKVWQPGVDALEDGEELQFDPEAYNYLRGFSIGWSC
LSFDVVRDQLGLVRSEFPHTFYGVAGTQAEKAPWNYIGIFKLSNISGKKREPIPPSAVDG
DTDVDSDSSSDEEDEEINEDTKPILHLKKVAHAGCVNRIRSMTQKPHICATWGDTGHVQV
WDLSSFLNSLAESGAPAPKEDDIIHKHLPVKVFSGHKDEGYAIDWSPLVAGRLVSGDCNK
CIHLWEPTPTNWNVDPNPFVGHSASVEDLQWSPTEADIFASCSVDGTIAIWDIRTGKKPR
MSVKAHKTDANVISWNRLASCMIASGCDDGSFSVRDLRSIQEDSLVAHFEYHKKAITSIE
WSPHEASSLAVTSEDHQLTIWDLSLERDAEEEAEFRAKMKEQANAPEDLPPQLLFVHQGQ
RDLKELHWHPQIPSMIVSTAIDGRGHRALRLQPHHGRGFPAARGQCAAGRDLHHGVRLWP
QRRTHRPGDLAVDSRAPPAASARARFLPYAAVVGYLSGASGLGASHHVADHLLALFGADA
SDKFHHPRHHDSAPSPDGGILLSGCQTDETSADVSGDDDEAAGEGGSKACGAFSSAVQAV
LAAHPAPVSNREVVTRAREVLREKGFEQHPCLYCSDANADAPFLCQQEEKEKRLQPPPAT
DSLAVYSAGVLTASDRLARRWAPILIRAHRRAVVV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatccaagaagaccaagaaagttgaagcttcatcgtcatctaatcctgtggtt
gcctctggtccggccaaggtctggcaaccgggtgtagatgcactggaagatggggaggag
ctccagtttgatcctgaggcttacaattatctccgagggtttagcattggctggtcttgc
ttgagttttgatgttgtgcgcgatcaacttggactcgtccgatcagagttcccccataca
ttctatggtgttgctggaacacaggctgagaaggctccatggaattatattggcattttc
aagctttctaacataagtgggaagaagcgggaacctataccaccttcagcagttgatggt
gacactgatgtggatagtgacagcagcagcgatgaagaagatgaagaaattaatgaggat
acaaagcccatcttacatctaaaaaaagtggcccatgcgggttgtgtaaatcggatacgc
tcaatgactcaaaaaccacatatatgtgctacatggggtgatactggtcatgttcaggtg
tgggacttgagctccttccttaattctttagctgagtcaggggcacctgcacccaaagaa
gatgacataatccacaaacacttacctgtgaaagtatttagtggccataaagatgaggga
tatgcaattgattggagtccgcttgttgctggaagacttgtttccggtgactgcaataag
tgcattcacctgtgggagccaactccaaccaactggaatgtagatccaaatccatttgtt
ggacactctgcaagtgttgaagatcttcagtggagtcccacggaagccgacatatttgcc
tcttgttctgtggatggtacaatagcgatatgggatatacgtacagggaagaaacctcgt
atgtctgtcaaggctcataaaaccgatgctaatgttatctcatggaataggcttgctagc
tgcatgatagcttcagggtgtgatgatggcagtttctcagttcgtgatcttagatcaatt
caggaggactcgttggtagcacattttgagtaccacaagaaagcaattacatctatcgag
tggagtccacatgaagcatcatcattagctgtaacatccgaagatcatcaactcacaatt
tgggacctttcattggaaagagatgcagaagaggaagctgagttcagagcgaagatgaaa
gagcaggcaaatgcacctgaagatttacccccacaacttctctttgttcatcagggccag
agagatttgaaagaactgcattggcacccacagataccctcaatgatcgtatcaacagca
attgacggacgaggccatcgtgccctgcgacttcaacctcatcacggacgtggatttccg
gcagctcgtggacagtgtgccgcagggcgcgaccttcaccatggtgtccgactctggcca
cagcggcggactcatcgaccaggggacctcgccgtcgacagccgtgcaccaccagctgct
tctgcccgcgcccgcttcctcccgtacgccgccgtcgtcggctacctctccggcgcctcg
ggtctcggcgcgtcccaccacgtcgctgaccacctcctcgcgctcttcggcgctgacgcc
agcgacaagttccaccacccgcgccaccacgacagcgcgccgagccccgacggcgggatc
ctgctgagcgggtgccagacggacgagacgtccgcggacgtgtcgggggacgacgacgag
gcggcgggggaggggggcagcaaggcgtgcggcgcgttcagcagcgcggtgcaggccgtg
ctggcggcgcacccggcgccggtgagcaaccgggaggtggtgacccgggccagggaggtg
ctgcgcgagaaggggttcgagcagcacccctgcctctactgcagcgacgccaacgccgac
gcgccgttcctctgccagcaggaggagaaggagaagcgactccagccaccaccggcgacc
gactcgctcgccgtgtactcggcgggcgtgctcaccgccagcgaccgactcgctcgccgc
tgggctccaatattaatccgtgctcaccgccgtgccgtcgtggtttga
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