Setaria viridis (green foxtail): 117864971
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Entry
117864971 CDS
T07951
Name
(RefSeq) small RNA degrading nuclease 1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117864971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svs03009
]
117864971
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
Pre-60S particles
RNases
117864971
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
117864971
NCBI-ProteinID:
XP_034604921
LinkDB
All DBs
Position
7:complement(30845262..30848900)
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AA seq
456 aa
AA seq
DB search
MAKRLAAAEKEVLVEVVRFTQKNGLKGSDGAWKDFLARNDRKFGASVSDPRKRSRDVLLA
FLQTFSKDFQKYFGKLVKRQKERSDVQQHMNDFPDQVSPEQKLVQLTAEHPEYRKNYCFP
SYQEGWKVLRIGDVSSLVSSSAMLAIDCEMVLCHDGTEAVVRVCVVDNNLEVKLDTLVNP
SKAITDYRTHITGVSKKDLEGVTSSLVDVQKSLKRILSKGKILIGHSLYRDLCALKIDCS
QVIDTAYIFKYANLPTTASASLNSLCKSVLGYSVQEEGEPHNCLKDAEAAMNLVLAKLKH
GFNDPIEVAVSSVITESDSLKLLAHRIPVHLPCQELCKVFSGNPSIDDKIDSRIRGEFYS
TCILFNEIDEVEKAFEALDGQMTKDSGGRLQKHVLMKRDNGDVVNFYVRKMVYSSQPNQF
EVPKKRPQPTEDAEPKKEHADGDQQKKKRKSKKHVN
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcggctcgccgccgccgagaaagaggtgctcgttgaggtcgtgaggttcact
cagaagaacgggttgaaaggctccgatggggcgtggaaggatttcttggctcggaacgac
aggaagtttggcgcttcagtaagcgaccccaggaagcgctcgagggatgtgctgctcgcc
ttcctgcaaaccttctccaaggatttccaaaagtacttcggcaaattggttaagcgtcaa
aaggaaagaagtgatgtgcagcagcatatgaacgattttcctgaccaggtttctcccgag
cagaaacttgttcaactgacggcagagcacccagagtacaggaaaaattattgcttccca
tcataccaagagggatggaaagtgttgcggataggagatgtctcaagtttggtgagctca
agtgctatgttggcaattgactgtgagatggtcctttgccatgatggcactgaggctgtg
gtccgagtatgtgttgtagacaacaatctggaggtgaagctggacacacttgtaaatcct
tctaaagctattactgactatagaacacacatcaccggtgtatctaagaaggatctagaa
ggagtcacatcatcattagttgatgttcagaaatcgctgaagaggatcttgtccaaagga
aaaattttgattggccacagcttatatagagatttatgtgccttaaagattgattgctct
caagttattgatacagcctacatctttaagtatgccaatttacctactactgcatcagct
tccttaaacagtttgtgcaagtctgttttggggtattctgttcaagaagaaggcgaacca
cataattgcttaaaggacgcagaagctgcaatgaatctagttctcgcaaagcttaagcat
ggatttaatgatcccattgaagtggccgtaagcagtgtaataactgagtctgattcgttg
aagttgcttgctcatagaataccggtgcacctgccttgtcaagaactgtgcaaagttttc
tctgggaaccccagtattgatgacaagattgattcaaggattcgaggtgaattttattct
acatgtattttgttcaatgagatagatgaggtagagaaagcttttgaagcactggatggc
caaatgactaaggactctggtgggcgacttcaaaagcatgtgctgatgaagcgtgacaat
ggagatgtggtgaacttctacgtccggaagatggtatacagttcccagcccaaccagttc
gaagttccaaagaagagaccacagcctactgaggatgcggaaccaaagaaagaacatgcc
gatggggatcagcaaaagaagaaaagaaagagtaagaagcatgtgaactag
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