Setaria viridis (green foxtail): 117865017
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Entry
117865017 CDS
T07951
Name
(RefSeq) protein SLOW WALKER 1
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117865017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svs03009
]
117865017
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117865017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_EIPR1
WDR90_beta-prop_4th
WDR54
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_RIG_2nd
Utp13
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
117865017
NCBI-ProteinID:
XP_034604985
LinkDB
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Position
7:complement(29662426..29664561)
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AA seq
539 aa
AA seq
DB search
MAAADTSKPFFPAAPHQALLPSRGAAARASLDGSYWRAFRSSELVSGADFPVTDLTFAPA
AATASSPTLAAAWSTSLHLFSGDPLKSLRRISVAGDLVFSPSFRCDGALLAAGDKKGVVR
VFRADKPATGAALRTLRAHAAETRVVRYPVGGGDKLHLLTAGDDALLTYWDVPSETPVFT
VPAAHKDYIRGGAASPADHNIFATGSYDRSVKLWDARTGNAGPSLSFSHGELVESVLFLP
SGGLLATAGGNVVKIWDVIGGGRLVHSVESHVKTVMALALGKMATTGETRLLSAGIDGYV
KCFDFGKLKITHSLRHPQPLLSVACSPCGTVLVAGSAKGKIYMGKRKKKAVDEEDEGTKA
GSGEIDWVSPESEKPVLKPNYFRYFLRGQNEKAKEGDFVIKKPKKVKIAEHDKLLRKFRH
KEALVSALVKNNPRSAVAVMEELVARRKLVRCIGNLDKEELGLLLEFLRRNATLPRYARF
LLGVANKVVEMREEDIRSDDKLRMHIRNLKRMVGEEIQIQHTLQGIQGMISPMLALAAR
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccgacacctccaagcctttcttccccgcggcgccgcaccaggcgctcctc
ccctcccggggcgccgccgcgcgcgcctccctggacggatcctattggcgcgccttccgc
tcctccgagctcgtctccggcgccgacttccccgtcaccgacctcaccttcgcccctgcc
gccgccaccgcctcctcgccgaccctcgccgccgcgtggtccacctcgctgcacctcttc
tccggcgacccgctcaagtcgctgcgccggatctccgtcgcgggcgacctcgtcttctcc
ccctccttccgctgcgacggcgccctcctcgccgccggcgacaagaagggggtcgtccgc
gtcttccgcgccgacaagcccgcgacgggcgccgccctccgcacgctccgcgcccacgcc
gccgagacccgcgtcgtccggtacccggtcggcggcggggacaagctccacctgctcacc
gccggagacgacgcgctcctcacctactgggacgtgccctcggagacgcccgtcttcacc
gtccccgccgcccacaaggactacatccgtggcggtgcggcctccccggccgaccacaac
atcttcgccaccggctcctatgaccgcagcgtcaaattgtgggatgcccgcacggggaac
gctggcccgtctttgtccttctcccatggggaattggtggagagcgtgctgttcctgccg
tccggcgggctgctggccacggccggagggaacgtggtcaagatttgggacgtcattggg
ggtggccggctcgtgcactccgtggagagccatgtcaagacagtgatggcgctggcgctt
gggaagatggccaccactggggagacccggctgcttagtgcgggcattgatgggtatgtg
aagtgctttgattttgggaagcttaagatcacgcactcgttgcggcacccacagccgctc
ctgtccgtggcttgttcgccctgtggcactgtgctggtggctgggtctgcaaaagggaag
atttatatgggcaagaggaagaagaaggctgttgacgaggaggatgaagggacgaaggct
ggcagtggtgagattgattgggtatcgccagagtctgagaagcccgtgttgaagccaaat
tacttccggtacttcctccgtggacagaatgagaaggctaaggagggtgactttgtgatt
aagaagcctaagaaggttaaaattgcggagcatgataagttactgagaaagttcaggcac
aaagaggctctggtttcagctttggttaagaacaacccaagaagcgctgtggctgtgatg
gaggagctggttgcgaggagaaagctggtgagatgcattgggaatttagataaagaggaa
cttgggctgctgcttgagttccttcgccggaatgcgacattgccaaggtatgcaaggttc
ttgttgggtgtagcaaacaaggttgtggagatgcgagaggaggatatccgatctgatgat
aagctgaggatgcacatcaggaatctcaagagaatggttggagaagagatccagatacag
cacacgttgcaggggattcaaggaatgatttcacccatgcttgcacttgccgccagatga
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