Setaria viridis (green foxtail): 117865086
Help
Entry
117865086 CDS
T07951
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase Pin1
KO
K09578
peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:
5.2.1.8
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117865086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svs03021
]
117865086
03110 Chaperones and folding catalysts [BR:
svs03110
]
117865086
Enzymes [BR:
svs01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
117865086
Transcription machinery [BR:
svs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117865086
Chaperones and folding catalysts [BR:
svs03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Parvulin
117865086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rotamase
Rotamase_3
Rotamase_2
X8
Motif
Other DBs
NCBI-GeneID:
117865086
NCBI-ProteinID:
XP_034605060
LinkDB
All DBs
Position
7:complement(2241587..2244034)
Genome browser
AA seq
124 aa
AA seq
DB search
MSSAAAGEGETVRASHILIKHEGSRRKASWKDPDGRVISATTRADAAARLLDLRNQILAG
QANFADLAARHSDCSSARRGGDLGTFGRRQMQKPFEDATFALKVGELSDLVDTDSGVHII
LRTA
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggcggcggcaggagagggcgagacggtgcgggcgtcgcacatcctcatcaag
cacgagggatcccgccgcaaggcctcctggaaggaccccgacggccgcgtcatctccgcc
accacccgcgccgacgccgccgcgcgcctcctcgacctccgcaaccagatcctcgccggc
caggccaacttcgccgacctcgccgcgcgccactccgactgctcctccgcgcgccgcggc
ggagacctaggtacttttgggaggaggcagatgcagaaaccctttgaggacgccaccttt
gccctcaaggttggtgagctcagcgacctcgtggacactgacagtggggttcacatcatc
ctgcggacagcctga
DBGET
integrated database retrieval system
