Setaria viridis (green foxtail): 117865120
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Entry
117865120 CDS
T07951
Name
(RefSeq) sister chromatid cohesion protein SCC4
KO
K11266
MAternally affected uncoordination
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
svs03036
]
117865120
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
117865120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cohesin_load
TPR_12
NRBF2_MIT
Motif
Other DBs
NCBI-GeneID:
117865120
NCBI-ProteinID:
XP_034605128
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Position
7:14826092..14831540
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AA seq
735 aa
AA seq
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MSFAAASASSACADGLLALADEAERRRDFPAAASCLESALRPPHAAALLPLAEARARLRL
ASLLLAPRGSSRAPRAGGGPAAAKAHLERALLILSPLPSAPPRLKLLAHSHLAGAYAVLG
AVPSQKHVLHRALGLLASVSASGLLQRGPALLWNCNFQAQLASALTVDGDPTSALSALST
GAAAAAELGNPQLELFFAASSLHVHLLCWEDSAAVENSVNRATQLWDALPAEQKEHWVGL
FFYIELLRTFYLLRICDYKAASQRVELLDTAAKSEMQRGRHIKELANDLRAVERTLGQPG
LKERERSALSHKQRQLKTQLRVLCGYDKLSDVLDYGDKLLLAPPPMHGEWLPRAAVFVLV
DLMVVMVGRPKGIFKECGKRIDSGLRLIHDELVKLGIVDGVTEVNLEHSTIWTAGLYLML
LLQFLENKVAVELTRSEFVEAQEALAQMKSWFSRFPTILQGCESTIEMLRGQYAHSVGCF
NEAAFHFLEAMKLTESKSMQSMCQVYAAVSYICKGDAESSSQALELVGPAYRTMDSFVGV
REKTCIIFVYGLLLMRQHNPQEARNRLASGLRIAHQQLGNIQLVSQYLTMLGTLALQLHD
AGQAREILKSSLTLAKTLFDIPTQIWILSVFTELYRELEERSNEMENSEYERKKEDDLER
RLSEAYSHAFHQELVEQSRIQIQPLHDMSRMQSEMAGPTANDDLDIPESVGLSAPQPSVK
RLVEQGSARRSTRRQ
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgccgccgcgtccgcgtcgtcggcgtgcgcggacgggctcctcgcgctggcc
gacgaggcggagcgccgtcgcgacttccctgccgcggcgtcctgcctcgagtccgctctc
cgcccgccccacgccgccgcgctcctcccactcgccgaggcccgcgcgcggctccgcctc
gcgtcactcctcctcgccccgcgcggctcctcccgcgccccgcgcgccggcggcggcccc
gccgccgccaaggcgcacctcgagcgcgcgctgctcatcctctccccgctcccctccgcg
ccgccgcgcctcaagctgctcgcccactcccacctcgcgggggcctacgccgtcctcggg
gccgtcccgtcgcagaagcacgtgctccaccgcgccctgggcctcctcgcctccgtctcc
gcttccggcctcctccagcgcgggccagcgctgctgtggaactgcaatttccaggcgcag
ctcgcgtccgctctcacagtcgacggggaccccacgtcggcgctctccgccctgtccacg
ggggcagccgccgccgccgagctcgggaatccgcagctcgagctcttcttcgccgcttcc
tcgctccacgtccacctcctctgctgggaggacagcgccgcggttgagaactccgtcaat
cgcgccacgcagctatgggacgccctccccgccgagcagaaggagcactgggttgggctt
ttcttctacattgagctgctgcggaccttctacctgctcaggatctgcgactacaaggct
gcctcacagcgtgtagagctcttggacacagctgcgaagagcgagatgcagagaggccga
cacattaaggagcttgctaatgacctcagagcagtggagaggacgctggggcagcctggt
ttgaaggagcgggagaggtcggcgctgtcacacaagcagaggcagctcaagacgcagctg
cgggtgttgtgcggttacgacaaattgagtgatgtgttggattatggggataagttgctt
ttggcgccaccaccgatgcatggagagtggctccctcgggccgcggtgtttgtgctcgta
gatctcatggtcgttatggtgggtcgtcctaaagggatatttaaggagtgtggcaagaga
atagattcaggcctccggctcatccatgatgaacttgtgaagcttggcattgtggatggt
gtgacagaggtgaatttggaacactcaacaatatggacagctgggctgtacttgatgctt
ttacttcaatttctggaaaacaaagttgctgtggaactgacaagatcagaatttgttgaa
gcccaagaggctttggcacagatgaaaagttggtttagtcgtttcccaacaatccttcaa
ggatgtgaaagcacaattgaaatgttaaggggacaatatgcacattctgttggttgcttt
aatgaggctgctttccacttccttgaagcaatgaagctgacagagagcaaatcaatgcaa
tcgatgtgccaagtctatgcagcagtttcatacatttgtaagggtgacgcagaatcgtct
tcacaggcactagaattggttggtcctgcttatagaacaatggactcttttgttggtgtg
cgagagaagacttgtattatttttgtttatggacttctacttatgagacagcataatccg
caagaagcacggaatcgccttgcaagtggtttgagaatagcacaccaacagttgggtaac
atccaattggtttctcagtacctaacaatgctgggcacattagcgcttcagctacatgat
gcaggacaggctagagagatcctcaagtcatcgttgaccttagctaagacgctatttgac
attccaacacaaatctggatcttgtcagtatttacagagttatatcgtgagttggaagag
agatcaaatgaaatggagaactctgagtatgagaggaagaaagaagatgatctggagaga
aggctttctgaagcttattctcatgcttttcaccaggagctggtggagcaatcaagaatc
cagattcagccgctacatgacatgtcgaggatgcagtcggagatggctggcccaaccgcg
aacgatgacctcgacattccggaatctgtggggctttctgctcctcagccttccgtcaaa
aggcttgtggagcaaggctcagcgaggcgcagtacaaggcggcagtag
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