Setaria viridis (green foxtail): 117865181
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Entry
117865181 CDS
T07951
Name
(RefSeq) DNA polymerase I A, chloroplastic
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03030
DNA replication
svs03410
Base excision repair
svs03420
Nucleotide excision repair
svs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117865181
03410 Base excision repair
117865181
03420 Nucleotide excision repair
117865181
03440 Homologous recombination
117865181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svs03032
]
117865181
03400 DNA repair and recombination proteins [BR:
svs03400
]
117865181
Enzymes [BR:
svs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117865181
DNA replication proteins [BR:
svs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
117865181
DNA repair and recombination proteins [BR:
svs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
117865181
NER (nucleotide excision repair)
GGR (global genome repair) factors
117865181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
117865181
NCBI-ProteinID:
XP_034605211
LinkDB
All DBs
Position
7:30264089..30271296
Genome browser
AA seq
1031 aa
AA seq
DB search
MAMAGTAPGPAPALLRRCPCSAPPWTPSPFRPRRRGRSMVSPFTGGRRQEYSQSSGVGIQ
DNRALKFGVCVNFNVQSSGAQEWAAESKRLSSIRTSNSTYSGSSHLGPAIIHHEHLEDFK
SSNQSSPHSVRQRMAPNSLANRHASVEPAKRHMINRAAAAVSALASVVKDDTKPIKRPNE
SEVEAHWPNGSKFHASLPKISEVETSLPFDDKATDGNAEDENECSPKETVQPPPARAPLS
QESKDARKALGTIYEKVLVVDDVKSARSVVQLLTTKYRNFFHACDTEVANIDVKQETPVG
HGKVTCFSIYSGTSGAEADFGNGKTCIWVDVLDGGQDVLMEFAPFFEDSSIRKIWHNYSF
DSHVIENYGIKVSGFHADTMHLARLWDSSRRLDGGYSLEGLTNDHRVMGVVPKELQKIGK
RSMKTIFGRKKIKKDGSEGKITAIEPVEILQREDRELWICYSSLDSMSTLRLYESLKSKL
ERKPWTFDGVPRGSMYDFYEEYWRPFGAVLVKMETAGMLVDRAYLSKIEKVAVAQRKLAA
DKFRKWASKYCPDAKYMNVNSDTQIRQLFFGGIENRCKPGEFLPTSKAIKVPNDETAVAE
GKKVPKYRTIELFSIVEDLKTDIFTASGWPSVSGDALRNLAGKVPSDLVYTTDDVNDDEC
GSDSEISDCDLEDTSSYGTAYEAFGGGKKGKEACHAIAALCEICSIDSLISNFILPLQGN
HISCKEGRIHCSLNINTETGRLSARTPNLQNQPALEKDRYKIRQAFVAAPGNTLIVADYG
QLELRILAHLADCKSMLDAFKAGGDFHSRTAMNMYQHIREAVEEERVILEWHPQPGQEKP
PVPLLKDAFGAERRKAKMLNFSIAYGKTAHGLARDWKVSVKEAKDTLKLWYSDRKEVLAW
QMKQKELAQEKCEVYTLLGRSRRFPNMAYATSGQRGHIERAAINAPVQGSAADVAMCAML
EIDRNTHLKELGWTLLLQVHDEVILEGPSESAELAKSIVVECMSKPFYGTNILNVDLAVD
AKCAQNWYAAK
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggccgggacggcgccggggcccgcgcccgcgctgctccggcggtgcccgtgc
tccgcgcctccgtggacgccctcgcccttccgcccccgccgccgcggccgctcgatggtc
tcgccgttcaccggcggcagaaggcaggagtactctcagagttcaggtgttggaattcaa
gacaacagagctcttaagtttggagtatgtgtcaactttaatgtgcaaagtagtggggca
caagaatgggctgccgagagcaagaggttatcttccatcagaaccagcaacagtacctat
agcggttccagtcatctagggcccgctattattcatcatgaacacctggaagatttcaag
agctccaaccagtcttcacctcacagtgtaagacaaagaatggcacctaattcccttgca
aataggcatgccagtgtggaacctgcaaagcgtcatatgattaatcgtgctgcagctgct
gtgtcagccctggccagtgttgttaaggatgacaccaaaccaattaaaaggcctaatgaa
tccgaagtggaggctcattggcctaatggttccaagtttcatgcttctcttccaaaaatt
tctgaagttgaaacaagcttaccatttgacgacaaggctacagatggcaatgctgaagat
gagaatgaatgctcacccaaggagacagtacaacctccaccagctagagcacccttgtct
caggagtctaaagatgcacggaaggcacttggtaccatctatgaaaaagttctggtggtt
gatgatgtcaagtcagctaggagtgtcgtccagttgcttactacgaagtacagaaatttt
ttccatgcatgtgacacagaggttgctaatattgatgttaaacaagagacaccagttggc
catggaaaggtcacgtgctttagcatatactctggcacttctggtgctgaagctgatttt
ggaaatggcaagacatgcatttgggtggatgtgctggatggtggacaggatgtccttatg
gagtttgccccattttttgaagattcatcaatcaggaagatttggcacaattatagtttc
gatagtcatgtcatagagaactatggaattaaagtttctggatttcatgctgatacaatg
catcttgcacgactttgggattcgtcaagaagactggatgggggatattctcttgaggga
cttacaaatgatcacagggttatgggtgttgttccaaaggaattgcaaaagattggaaag
cgatcaatgaaaaccatctttggtaggaaaaagataaaaaaggatggatcggaaggtaaa
attactgcaattgagcctgttgaaattttacaaagagaggacagagagctgtggatctgt
tattcttcactagattccatgagtaccttgaggctttatgaaagcttgaaaagcaagctt
gaaaggaagccctggacttttgatggtgttccaagaggttcaatgtacgatttctacgag
gagtattggcgtccttttggtgctgttcttgtcaaaatggaaacagctggaatgcttgtc
gaccgtgcttacctttcaaagattgaaaaagttgctgttgcacagcgcaaattagctgct
gataaatttcggaagtgggcatctaagtattgccctgatgcgaaatacatgaatgttaat
agcgatactcagattcgacaactcttctttggtggtatagagaacagatgcaaacctggt
gaatttttgccaacgagtaaggctattaaagtgcctaatgatgaaactgcagttgcagaa
ggcaagaaggttccaaagtatcgcacaattgaacttttcagtattgtggaagacctcaaa
actgatatattcacagctagtggctggccttcagttagtggggatgcattgagaaatttg
gctgggaaagttccttcggatcttgtttacacgacagatgatgtaaatgatgatgaatgt
ggtagcgattctgaaatttctgattgtgatctagaagacacctcctcttatggaactgca
tatgaagcatttggaggagggaagaaaggaaaagaagcatgccatgccattgccgctcta
tgtgagatatgctcaattgactcgttgatatccaacttcattcttccattacagggaaat
catatatcatgtaaggaggggcggatccactgttccttaaatatcaacacagaaacaggg
cgtttatctgcaaggacaccaaatttacagaaccaacctgcacttgaaaaggatcggtat
aaaatccgccaagcttttgttgcagctccagggaacactcttattgttgctgattatggt
cagctggagctcaggatcttggcacatcttgctgattgtaaaagcatgttagatgctttc
aaagctggcggtgacttccattccaggacagccatgaacatgtaccagcatattcgcgaa
gctgttgaagaagagagagtaattcttgaatggcatcctcaacctggtcaagagaaacct
cctgtgccactgttgaaggatgcttttggtgctgagaggaggaaagctaaaatgctaaat
ttctccattgcatacggaaaaacagcccatgggcttgctcgggattggaaggtttctgtt
aaggaagcaaaagacacactgaaactctggtatagcgatagaaaggaggttctggcttgg
caaatgaagcagaaagaactagcacaggagaagtgtgaagtttatactttacttgggcga
tcacgccgttttccaaacatggcttatgcaacttctggccaaaggggtcacattgagcgt
gctgctatcaatgctcctgtacagggcagtgcagcagatgttgccatgtgcgcaatgctt
gagatagacaggaatactcatctgaaggagcttggttggacgctactcttgcaggtgcat
gatgaagtgatactggaagggccttcagagtctgctgaactggccaagtccatagtggtc
gagtgcatgtctaagcccttctacggcaccaacatcctgaatgttgacctggctgttgat
gccaaatgtgcgcagaattggtatgccgccaagtag
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