Setaria viridis (green foxtail): 117865236
Help
Entry
117865236 CDS
T07951
Name
(RefSeq) synaptotagmin-5-like
Organism
svs
Setaria viridis (green foxtail)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
SMP_LBD
MMM1
Motif
Other DBs
NCBI-GeneID:
117865236
NCBI-ProteinID:
XP_034605280
LinkDB
All DBs
Position
7:30535207..30540230
Genome browser
AA seq
577 aa
AA seq
DB search
MGFWVGMLLGVAAGVAIIVGFARSENSRAARRRQLAATIASFSKMTIDDSRKLLPPDLYP
SWVVFSSQQKLKWLNQELTKIWPFVNQAASELIKTSVEPTLEQYRPIILASLKFSKLTLG
TVAPQFTGISIIENNKESGIVMELEMNWDANPNIILDVKTRLGVALPIQVKDIGFTGIFR
LIFKPLVEELPCFGAVCFSLRKKKKLDFRLKVIGGEISAIPGISDALEETIKNAIEDSIT
WPVRKVIPIIPGDYSDLELKPVGTLEVKLVQARDLTNKDLIGKSDPFAIVYVRPLPDKMK
RSKTINNDLNPIWNEHFEFIVEDADTQTVTVKIYDDDGIQESELIGCAQVRLKDLQPGKV
KDIWLKLVKDLEIQRDRKDRGQVHLELLYCPFDMKDDAPNPFRQQFSMTSLERTMTSMEN
GSGGSSFDMMSSSRKRKEIIVRGVLSVTVISGEDLPAMDMNGKSDPYVVLSLKKTKTKYK
TRVVNESLNPVWNQTFDFVVEDGLHDMLILEVYDHDTFRRDYMGRCILTLTKVLLEEDYE
ESFNLEGAKSGKLNLRLKWSPQPIMRDSREEDSLRFR
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggggttctgggtcgggatgctgctgggggtcgcggcgggcgtcgccatcatcgtcggc
ttcgcccgctccgagaactcccgcgccgcacgccgccgacagctggctgccactattgct
agtttttcaaaaatgacaattgacgattcgcggaagttactcccacctgacctgtaccct
tcttgggttgttttctcatcgcagcaaaagttaaaatggcttaatcaagagctgacaaag
atctggccgtttgtgaatcaggcggcatcagaactgatcaaaacctctgtagagcctact
cttgaacaatataggccaataatcctagcgtccctgaagttctcaaaactcactcttggt
actgttgcaccacagtttaccggtatttccatcattgagaataataaggaatcaggtatt
gtcatggagctagagatgaattgggatgccaatccaaatattatacttgatgtaaaaact
agacttggtgtggcacttccaatacaggtgaaggacattggctttacaggaattttccgc
ttgattttcaaaccactggttgaagagctaccttgctttggagctgtttgcttttctcta
cgaaagaagaaaaagctggatttcagactgaaggtcattggtggtgaaatttctgctata
cctggaatttcagatgctcttgaggaaactataaaaaatgctattgaagattcaataaca
tggccagtaaggaaagttattcctataatacctggggactacagtgatttggaactgaag
cctgttggtacattggaagtcaaacttgtgcaagcaagagatttgacgaacaaagatctg
ataggaaaatcagatccttttgccattgtgtacgtccgcccattgccagacaaaatgaag
agaagtaaaacaattaacaacgatcttaaccctatctggaatgaacacttcgagtttatt
gttgaagatgctgatactcaaactgtaaccgtgaagatttatgatgatgatggtattcag
gaatctgaattaattggctgtgctcaagtcaggctaaaggatctacaaccagggaaagtg
aaggatatctggttgaagcttgtaaaagatctggagattcaaagggacagaaaagacagg
ggccaggtgcatcttgagctgctctactgtccatttgacatgaaggatgatgctccaaat
cctttcagacaacagttttctatgacttcgttggagagaacaatgactagtatggaaaac
ggatcaggaggatctagttttgacatgatgtcttcatcaaggaagagaaaggaaattatc
gtgcggggggttctgtcagtaactgtgatatccggggaggatttgccggcaatggatatg
aatggaaagtccgatccatatgttgtactttctctcaagaagacaaaaacaaagtacaag
accagggttgtgaatgaaagcttgaacccagtctggaatcagactttcgactttgtcgtt
gaagatggcttacatgatatgcttatattggaagtatatgatcacgacacattccggaga
gattacatggggcggtgcatcctgaccttgacaaaagttttgctggaagaagactacgag
gagagcttcaacctggagggagcaaagagtgggaagctgaacttgcgtctgaagtggtcg
ccacaaccaattatgcgtgattcacgagaagaggacagcttaaggttcagataa
DBGET
integrated database retrieval system