Setaria viridis (green foxtail): 117865303
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Entry
117865303 CDS
T07951
Name
(RefSeq) beta-D-xylosidase 4
KO
K15920
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00520
Amino sugar and nucleotide sugar metabolism
svs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
117865303
Enzymes [BR:
svs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
117865303
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GFIT
Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
Motif
Other DBs
NCBI-GeneID:
117865303
NCBI-ProteinID:
XP_034605352
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Position
7:complement(30363981..30370557)
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AA seq
770 aa
AA seq
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MAAAAPPFSAPAAAAVAAALLLCFFSGCNAQTPVFACDASNATLAAYGFCNRSATPAARA
ADLVSRLKLAEKVGFLVDKQAALPRLGIPAYEWWSEALHGVSYVGPGTRFSPLVPGATSF
PQPILTAASFNVTLFRAIGEVVSNEARAMHNVGLAGLTFWSPNINIFRDPRWGRGQETPG
EDPLLTSKYAVGYVTGLQDAGSGAGGDSLKVAACCKHYTAYDVDNWKGVERYTFNAVVSQ
QDLDDTFQPPFKSCVIDGNVASVMCSYNQVNGIPTCADKDLLSGVIRGDWKLNGYISSDC
DSVDVLYNNQHYTKTPEDAAAISIKAGLDLNCGNFLAQHTVAAVQAGKLSESDVDRAITN
NFITLMRLGFFDGDPRKLPFGSLGPSDVCTSSNQELAREAARQGIVLLKNSGALPLSAKN
IKSMAIIGPNANASFTMIGNYEGTPCKYTTPLQGLGANVATVYQPGCTNVACSGNSLQLD
AATKAAASADVTVLVVGADQSIERESLDRTSLLLPGQQPQLVSAVANASSGPCILVIMSG
GPFDISFAKSSDKIAAILWVGYPGEAGGAAIADVLFGYHNPSGRLPVTWYPESFTKIPMT
DMRMRPDKSTGYPGRTYRFYTGDTVYAFGDGLSYTSFAHHLVSAPTHVAVVLAEGHACLT
EHCLSVEAEGGHCDKLVFDVHLRVRNAGEVAGRHTVFLFSSPPAVHNAPAKHLLGFEKVS
LEPGQAGVVAFKVDVCRDLSVVDELGNRKVALGSHTLHVGDLKHTINLRV
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcggcgcctccgttctcggctccggcggcggccgcggtggcggcggctctg
ctgctctgcttcttcagcggctgcaatgcgcagacgccggtgttcgcgtgcgacgcgtcg
aacgcgacgctggcggcgtacgggttctgcaaccggtcggcgacgcccgccgcgcgcgcc
gccgacctggtgtcgcggctgaagctggcggagaaggttgggttcctggtggacaagcag
gcggcgctgccccggctgggcatcccggcgtacgagtggtggtccgaggcgctgcacggc
gtgtcctacgtggggcccggcacgcggttctcgccgctggtgcccggcgccaccagcttc
ccgcagcccatcctcacggcggcgtccttcaacgtcacgctcttccgcgccatcggcgag
gtggtgtcgaacgaggcgcgggcgatgcacaacgtggggctggcggggctcacgttctgg
agccccaacatcaacatcttccgggacccgcggtggggacgcgggcaggagacccccggc
gaggacccgctcctcaccagcaagtacgccgtcggctacgtcacgggcctgcaggacgcc
ggctccggcgccggcggcgacagcctcaaggtcgccgcgtgctgcaagcactacaccgcc
tacgacgtcgacaactggaagggcgtcgagcgctacaccttcaacgccgtggtgtcgcag
caggacctggacgacacgttccagcccccgttcaagagctgcgtgatcgatgggaatgtg
gccagcgtcatgtgctcctacaatcaggtcaatgggattcccacctgcgcagacaaggat
ctcctgtcaggagtcatcagaggagactggaagctgaatggatatatttcgtcagactgc
gactccgttgatgtgttgtacaataaccagcactacaccaaaacacccgaggacgcggcc
gccatctcgatcaaagcagggctggacctgaactgcggcaacttcctggcgcagcacacc
gtggcggccgtgcaggccggcaagctctcggagtccgacgtcgaccgggccatcaccaac
aacttcatcacgctcatgcgcctgggcttcttcgacggcgacccgcggaagctcccgttc
ggcagcctcggccccagcgacgtgtgcacgtcctccaaccaggagctggcccgcgaggcc
gcgcgccagggcatcgtgctcctcaagaacagtggcgcgctcccgctctccgccaagaac
atcaagtccatggccatcattggccccaacgccaatgccagcttcaccatgatcggcaac
tacgagggcacgccgtgcaagtacacgacgcctctgcagggcctgggcgcgaacgtcgcc
accgtgtaccagccgggctgcacaaacgtcgcgtgcagcgggaacagcctccagctcgac
gccgccacgaaggccgcggccagcgccgacgtgaccgtgctggtcgtcggcgccgaccag
tccatcgagcgcgagagcctcgaccggacgagcttgctcctgccgggccagcagccgcag
ctcgtgtccgcggtcgccaacgcgtccagcggcccctgcatcctcgtcatcatgtccggt
gggccgttcgacatctcgttcgccaagtccagcgacaagatcgccgcgattctttgggtc
ggctaccccggcgaagccggcggcgccgccatcgccgacgtcctcttcggataccacaac
ccaagtggaaggttgccggtgacgtggtaccccgagtcgttcaccaagatccccatgacc
gacatgcggatgcggccggacaagtcgaccgggtaccccggccggacgtaccggttctac
acgggcgacacggtgtacgccttcggggacggcctgagctacaccagcttcgcacaccac
ctcgtgtcggcgccgacgcacgtggccgtggtgctcgcggagggccacgcgtgcctaacc
gagcactgcttgtccgtggaggccgagggcgggcactgcgacaaactggtgttcgacgtg
cacctccgggtgcgcaacgccggcgaggtggccggccggcacacggtgttcctgttctcg
tcgccgccggcggtgcacaacgcgccggcgaagcacctgctggggttcgagaaggtgtcc
ctggagcccgggcaggccggcgtggtggcgttcaaggtggacgtgtgcagggacctcagc
gtcgtcgacgagctcggcaacaggaaggtggcgctgggcagccacacgctgcacgtcggg
gacctcaagcacacgatcaacttgagggtttaa
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