Setaria viridis (green foxtail): 117865503
Help
Entry
117865503 CDS
T07951
Name
(RefSeq) homeobox-leucine zipper protein ROC2
KO
K09338
homeobox-leucine zipper protein
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117865503
Transcription factors [BR:
svs03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
117865503
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
TUSC1
DivIC
DciA_cyano_C
MRP-L20
Motif
Other DBs
NCBI-GeneID:
117865503
NCBI-ProteinID:
XP_034605623
LinkDB
All DBs
Position
7:complement(29787370..29794345)
Genome browser
AA seq
781 aa
AA seq
DB search
MMIPARHMPSMMIGRNSAAAAYGSSSALSLGQPNLLDNPQLQQALQQQHLLDQIPATTAE
SGDDMMRGGRGSDPLGDEFESKSGSENVDGVSVDDQDPNQRPSKKKRYHRHTQHQIQEME
AFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERQENSQLRADNEKLRA
ENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRIENARLREEIDRISAIAAKYVGKPMV
SFPVLSSPLAAARASTLDIGVGAGAYGATDIFGSVTAGAGELLRGAVQSDADKPMIVELA
VAAMEELVRMAQLDEPLWNAPGLDGSSETLNEEEYSRMFPRGLGPKQYGLKSEASRDSSV
VIMTHANLVEILMDVNQYATVFSSIVSRAATLEVLSTGVAGNYNGALQVMSVEFQVPSPL
VPTRESYFVRYCKQNADGTWAVVDVSLDSLRPGSVLKCRRRPSGCLIQEMPNGYSKVTWV
EHVEVDDRSVHDIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASNIPTSDIGVITSTE
GRKSMLKLAERMVMSFCGGVTASAAHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLNA
ATSFWLPVPPKRVFDFLRDESSRSEWDILSNGGVVQEMAHIANGRDHGNCVSLLRVNSTN
SNQSNMLILQESCTDASGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDGPAGG
NMQGDGGVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAVSGESNP
Q
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcccggcgaggcacatgccgtcgatgatgatcggccggaacagcgcggcggcg
gcgtacgggtcctcgtcggcactgtcactcggtcagccaaacctgctggacaacccgcag
ctccagcaggcgctgcagcagcagcatctgctggaccagatcccggcgacgacggcggag
agcggcgacgacatgatgcgcggcggccggggctccgacccgctgggggacgagttcgag
agcaagtcaggcagcgagaacgtggacggcgtctccgtggacgaccaggaccccaaccag
cggcccagcaagaagaaacgctaccaccgccacacccagcaccagatccaggagatggaa
gctttcttcaaggagtgcccacacccggatgacaagcagcgcaaggagctgagccgggag
ctggggctggagccactccaggtcaagttctggttccagaacaagcgcacgcaaatgaag
aaccagcacgagcggcaggagaactcccagctacgggcggacaacgagaagctccgggcc
gagaacatgcggtacaaggaggccctgagcagcgcgtcctgccccaactgcggcgggcct
gccgcgctcggcgagatgtccttcgacgagcaccacctccgcatcgagaacgcccggctc
cgcgaggagatcgacaggatctcggccatcgcggccaagtacgtgggcaagcccatggtg
tccttccccgtgctctccagcccgctggctgcggcgcgcgcctcgacgctggacatcggc
gtgggtgccggcgcgtatggtgctactgacatcttcggtagcgtcactgctggtgccggg
gagctgctgaggggtgccgtgcagtcagacgcagataagcccatgatcgtggagctggcc
gtcgcagccatggaggagctggtgcgtatggcgcagctggacgagccgctttggaatgcg
ccggggctcgacggatcgagcgagacgctgaacgaggaggagtactcgcgcatgttccct
cgcgggcttggccctaagcagtatgggctcaagtctgaagcgtcccgcgacagctcggtg
gttataatgacacatgccaacctcgtcgagatcctcatggacgtgaatcagtacgcgaca
gtgttctcgagcattgtgtcgagagcagcgacactggaggtgctgtccactggcgtggcc
gggaactacaacggtgcattgcaagtgatgtcagtggagtttcaggtgccttccccgctg
gtgccgaccagggaaagctacttcgtgaggtattgcaagcagaacgctgatgggacatgg
gctgtcgttgacgtctcgctggacagcctgcgccccggatcagtcctcaagtgccggcgc
cggccatctggctgcctgatccaggaaatgcccaatggctactcgaaggtgacttgggtt
gagcatgtagaggtggatgacaggtcggtgcacgacatctacaagttgcttgtgaactca
gggcttgcctttggtgcacgacgatgggtcgggacgctggaccgccagtgcgagcgcctc
gccagcgtaatggccagcaatataccaaccagtgacattggtgtgatcacaagtacggaa
gggagaaagagcatgctgaagctggcagagaggatggtgatgagcttctgcggcggcgtg
actgcctctgcagcacaccagtggaccacgctgtcaggcagcggcgctgaggacgtccgt
gtcatgaccaggaagagcgttgacgacccaggcaggccgccgggcatcgtcctcaatgca
gccacctccttctggctccccgtcccacccaagcgcgtcttcgatttcctccgcgatgag
agctctcgcagcgagtgggacatcctctccaatggcggtgttgttcaagaaatggctcac
atcgccaatggccgggatcatggcaactgcgtctcgcttcttcgtgtcaatagcacaaac
tcgaaccaaagcaacatgctgatcctgcaagagagctgcaccgacgcgtcgggttcctat
gtcatctacgcgccggtagacgttgtggccatgaacgttgtcctcaacggcggggatcct
gactatgtggcgctcctgccatcgggctttgccatcctacccgacggcccagccgggggc
aacatgcaaggcgatggtggcgtcggctcaggtggctcgctcctgacagtggcgttccag
atactagtggactctgtgcccacagccaagctctcgctggggtcagtggcaacggtgaac
agcctcattgcttgcaccgtggagcgcatcaaggccgcggtctcaggcgagagcaatccc
caatag
DBGET
integrated database retrieval system
