Setaria viridis (green foxtail): 117865605
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Entry
117865605 CDS
T07951
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00061
Fatty acid biosynthesis
svs00071
Fatty acid degradation
svs01100
Metabolic pathways
svs01212
Fatty acid metabolism
svs04146
Peroxisome
Module
svs_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
117865605
00071 Fatty acid degradation
117865605
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117865605
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
svs01004
]
117865605
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117865605
Enzymes [BR:
svs01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
117865605
Lipid biosynthesis proteins [BR:
svs01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
117865605
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of breast milk
117865605
Exosomal proteins of breast cancer cells
117865605
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
117865605
NCBI-ProteinID:
XP_034605716
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Position
7:32964995..32970648
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AA seq
698 aa
AA seq
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MNPYFVGFLVPVAVSLLLRKRRKAERKRGVQVEVGGEPGYAVRNYRFEQPVETHWEGVST
LAELFERSCKEYVYMPLLGTRKLISRETESAPGGRSFEKLHLGEYEWKCYAEAFKSVCNF
SSGLIRLGHQKNERVAIFAETRAEWQVALQACFRQNITVVTIYASLGEEALCHSLNETEV
TTVICGQKELKKLIDISGQLDTVTRVVYINEEGISDEVSLARNSTSWIIESFDEVGRLGT
EAPVEANMPLPSDVAVIMYTSGSTGLPKGVMMTHRNVLATLSAVMTIVPVLGSKDIYLAY
LPLAHILELAAEALMAAVGASIGYGSPLTLTDTSSKIKKGTLGDASALKPTLMTAVPAIL
DRVRDGVRKKVDGTGGAAKKLFDIGYNRRLAAINGSWFGAWGLEKHLWDTLVFGKVRAIL
GGKIRFVLSGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGGTFSEYDDTSVGRVGAPL
PCSYIKLIDWPEGGYLTTDSPMPRGEIVIGGPNVTKGYFKNEAKTNEVYKDDEKGMRWFY
SGDIGRFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALIVSPYVENIMVHADPFHNYC
VALVVAAHNELENWASQQGIKYIDFSDLCQKQEAVKEVLGSIAKAGKQARFEKFEIPAKI
KLIPEPWTPESGLVTAALKLKREVIRKTYENDLAQLYA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttattttgttggcttccttgttcccgtcgcggtctccctgctgctccgcaag
aggagaaaggctgaaaggaagaggggagtgcaagttgaggtgggtggagagcctggatat
gcagtccgcaactatcgatttgagcagcctgttgagacgcactgggaaggggtgtccacc
cttgctgagctgttcgagcggtcttgcaaggagtatgtctacatgccactccttggcacc
aggaagctcatttctagggaaactgaatcagcacctggtggaagatcattcgagaagctt
catctgggcgagtatgagtggaagtgttacgctgaggccttcaagagcgtttgtaacttc
tcatctggactaattcgattaggccaccagaagaatgagcgtgttgccatttttgccgag
acgagagctgaatggcaggttgctttgcaggcatgcttcagacaaaatattacagttgtc
accatctatgcctcattgggagaggaagcactatgccactcactaaatgagactgaggtc
actactgtaatttgtggccagaaagaactaaaaaaattgattgatataagtgggcagctt
gacactgtcacacgtgttgtatatatcaatgaggaaggcatctcagatgaagtttcttta
gctcgaaatagcacgagctggataattgagtcatttgatgaagtgggtaggttaggaact
gaagcacctgttgaagcaaacatgcctctcccatctgatgttgcagtgataatgtacaca
agtggtagcaccggcttacccaagggagttatgatgacccaccgcaatgtcctggctaca
ctctcagcagttatgaccatcgtgcctgtacttggtagtaaagatatatacttggcctac
ctcccacttgcacacattcttgagttggcagctgaggcactaatggctgctgttggggcc
tctatcggatacggatcacctttgactctgactgatacatcgagcaaaataaaaaaggga
actctaggtgatgcttctgcactgaaaccaacattgatgactgccgtacctgctatactt
gaccgtgttcgtgatggtgtgaggaaaaaggtggatggtacgggtggtgcagcaaagaaa
ttgtttgacattggctataaccgccggcttgcagcaatcaatggaagctggtttggtgcc
tgggggttagagaaacacttgtgggatacgcttgtgttcggaaaggtgcgtgcaattttg
ggaggaaagattcggtttgtactctcaggcggagcacctctatctggagatactcagaga
tttatcaatatatgccttggggctccaataggtcaagggtatggtctgactgaaacttgt
gctggagggacattttctgagtatgatgatacatctgttggccgtgttggtgctccacta
ccttgttcatatattaagttgattgattggcctgaaggtggatacttaacaactgattca
cctatgcctcggggagaaatagtcatagggggtcctaatgtaaccaaaggctatttcaag
aatgaagccaaaacaaatgaagtctacaaagatgatgaaaaaggtatgcggtggttctat
tctggtgatattggacgtttccacccagatggatgccttgaaatcattgaccgtaagaaa
gatattgtgaagcttcaacatggtgaatacgtatctctggggaaggtggaggctgctttg
attgtgagcccatatgtggagaacatcatggttcacgctgatcctttccacaactactgt
gttgcacttgtggtagctgcacataatgagctggagaactgggcttcgcagcaaggaatt
aaatatattgatttctctgatttgtgccagaagcaagaggctgttaaagaagtgcttggg
tctatagcaaaggctggaaagcaagcgcgatttgagaagttcgagatcccagccaaaatc
aagttgataccagagccatggacccctgagtcgggccttgtcactgctgccctcaagctc
aagagggaggtgatcaggaagacgtacgagaatgatctggctcagttgtacgcctga
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