Setaria viridis (green foxtail): 117865796
Help
Entry
117865796 CDS
T07951
Name
(RefSeq) nod factor hydrolase protein 1-like isoform X1
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00520
Amino sugar and nucleotide sugar metabolism
svs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
117865796
Enzymes [BR:
svs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
117865796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
Motif
Other DBs
NCBI-GeneID:
117865796
NCBI-ProteinID:
XP_034605923
LinkDB
All DBs
Position
7:complement(15967924..15974868)
Genome browser
AA seq
506 aa
AA seq
DB search
MFPSNDTSTTATDDTGLLAPTPIPTHSDRPLRRAPTTSPPPAMPSSASSTLLAVAMVSLS
LAASAAPAPPDDARGTTVRAGFYLAAAARLRPLAALDASHYTHLYYSALAVHPTTRKLVL
PTDPDQAGLLAAFSPALKSRNRNLRTLLSVGTAGVAWAAAGSQADPAFAAMAADPASRAA
FGAAAVALARDSGFDGLDVAWRFPASAVEMADLGFLVSEWRAAAPPGFLLTATAYFSSHV
FAAPLPSVDYPSEALARCLDWVNVAAFGLRPPGGANATTAFDAPLYDRASHFSASYGVVS
WIDAGLPAGKVVMGIPLYGRSWFLRNKANAGVGAPVVAAGPKQRGSNATGVMSYAEVQRL
AAAAAGGGGRRTATTAYDNASVASYLSVGDVWVAFDGAAVVAEKLAFAARRGLLGYFLWP
VNYDDANLTLSRTASEVWMQNEMSSDWKNGTGVRQTQGPVRLPPALRSPAGTPGPVPAPT
SGSGSWLPWAKLDALLHLGLLCLVWC
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtttccctccaatgacaccagcacaaccgcaaccgacgacaccggcctcctcgctccg
actccgatccccacccactccgaccgccccctccgccgagctcccaccacctccccgccg
ccggcgatgccgtcgtccgcctcctccaccctcctcgccgttgccatggtctcgctctcc
ctcgctgcgtcggcggctcctgcgccgcccgacgacgcccgagggacgacggtgcgcgcc
ggcttctacctcgccgcggccgcccgccttcgcccgctcgccgcgctcgacgcctcccac
tacacgcacctctactactcggccctcgccgtgcacccgaccacccgcaagctcgtgctc
ccgacggacccggaccaggcgggcctcctcgccgcattctccccggcgctcaagtccagg
aaccgcaacctcaggaccctgctctctgtcggcaccgccggcgtcgcgtgggcggcggcc
ggttcccaggccgacccggcgttcgccgccatggcggcggacccggcgtcccgcgcggcg
ttcggcgccgcggccgtcgcgctcgcccgcgacagcggcttcgacgggcttgacgtcgcg
tggcggttcccggcgtcggcggtcgagatggccgaccttggattcctcgtctccgagtgg
cgcgccgccgcgccccccgggttcctgctcaccgccacggcctacttctccagccacgtc
ttcgccgcgccgctccccagcgtcgactacccgtccgaggccctggcgaggtgcctcgac
tgggtcaacgtcgccgcgttcgggctccgaccgccgggcggcgccaacgccacgacggcc
ttcgacgcgccgctctacgaccgggcgtcccacttctcggcgagctacggagtcgtgtcg
tggatcgacgccggcctcccggcgggcaaggtggtcatgggcatcccgctctacggccgc
tcgtggttcctgcgcaacaaggccaacgccggcgtcggcgcccccgtcgtcgctgcgggg
cccaagcagcgcgggagcaacgccaccggcgtcatgtcctacgccgaggtccagcggctc
gccgccgccgccgccggcgggggcggccggcgcacggccaccacggcgtacgacaacgcg
tccgtagcgtcctacctgtccgtgggcgacgtctgggtcgccttcgacggcgcggccgtc
gtggccgagaagctcgccttcgccgcgcgtcgagggctcctcggctacttcctctggccg
gtgaactacgacgacgccaacctcacgttgtccagaacagcatcggaggtctggatgcag
aacgagatgtcgtcagattggaagaacggcaccggcgtcaggcagacgcagggcccggtg
cggctgccgccggcgctccggtcgcctgcgggaacgcctggaccggtgccggcaccgacg
tctgggtcgggctcatggttgccttgggcgaagcttgatgcgcttctgcatttggggctg
ctatgtcttgtgtggtgttag
DBGET
integrated database retrieval system
