Setaria viridis (green foxtail): 117865828
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Entry
117865828 CDS
T07951
Name
(RefSeq) protein argonaute 1B isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svs03019
]
117865828
03036 Chromosome and associated proteins [BR:
svs03036
]
117865828
Messenger RNA biogenesis [BR:
svs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117865828
Chromosome and associated proteins [BR:
svs03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
117865828
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
117865828
microRNA pathway
RISC loading complex
117865828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
Gly-rich_Ago1
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
117865828
NCBI-ProteinID:
XP_034605957
LinkDB
All DBs
Position
7:complement(26517565..26537296)
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AA seq
1104 aa
AA seq
DB search
MICDLDMAMRVENGRPHQVPIMVRKKRTGPGGSGETSGESSGASGQGSSQRPERTQQHGG
GRGWPQQGGRGGGQYQGRGGHYQGRGGPGPHHPGGGPPEYHPRDYQGRGGEYQGRGGDYQ
GRGGEYQGRGGPRPRGGMPQPYYGGQRGGSVGRNVPPGPSRTVPELHQAPYVQYQAPMVS
PSPSGPGSSSQPVTEVSSGHVQQQFQQLSIRGQTSTSQEIQVAPASSKSVRFPLRPGKGT
YGDRCIVKANHFFAELPDKDLHQYDVSITPEVTSRGVNRAVMGELVTLYRQSQLGGRLPA
YDGRKSLYTAGPLPFTSRTFEITLQDEEDSLSGGQGGQRRERVFRVVIKFAARADLHHLA
MFLAGRQADAPQEALQVLDIVLRELPTARYSPVGRSFYSPDLGRRQQLGEGLESWRGFYQ
SIRPTQMGLSLNIDMSSTAFIEPLPVIDFVAQLLNRDISVRPLSDSDRVKIKKALRGVKV
EVTHRGNMRRKYRISGLTSQATRELSFPVDDRGTVKTVVQYFMETYGFSIQHTTLPCLQV
GNQQRPNYLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQRPQERELDILQTVHHNAYYE
DPYAQEFGIRIDERLAAVEARVLPPPRLKYHDSGREKDVLPRVGQWNMMNKKMVNGGRVS
NWACINFSRNVQDSAARGFCHELAIMCQISGMDFALEPVLPPLTARPEHVERALKARYQD
AMNILRPQGRELDLLIVILPDNNGSLYGDLKRICETDLGLVSQCCLTKHVFKMSKQYLAN
VALKINVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQD
WPEVTKYAGLVSAQAHRQELIQDLFKVWQDPQRGTVTGGMIKELLISFKRATGQKPQRII
FYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRT
VDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLT
NNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASGARGPPPGGARSSR
AAGSVAVRPLPALKENVKRVMFYC
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgatttgtgaccttgacatggcgatgcgggtggagaacgggcgcccccatcaagtgccc
atcatggtgaggaagaagagaactggccctggcggttccggagaaacttccggagagtct
tcaggggcttctggacaaggttcctcacagcgacctgagcgaactcaacaacatggagga
ggacgcggctggcctcaacagggtggccgtggtggtgggcaataccagggccgtggtgga
cattatcagggccgtggagggccagggccacatcacccaggtggtgggccacctgagtat
cacccgcgtgactaccagggacgtggtggtgaataccagggacgtggtggcgactaccag
ggacgtggtggtgaataccagggacgtggtggcccccgtcccagaggtggaatgccgcag
ccatactatggcgggcaaaggggaggtagtgttggacgaaatgttcctccaggtccatcc
agaacagttcccgagctgcaccaagccccatatgtccagtatcaagccccgatggtttca
ccatccccatcgggacctggctcatcctcacagcctgtgacagaggtgagctctggacat
gtccagcaacaatttcagcaactttctattcgtggtcagacttccacaagtcaagaaatt
caagtggcaccggcatcaagcaaatcagttcgattcccgctgcgccctggcaagggcact
tatggggacaggtgcattgtgaaagcaaaccatttctttgctgaacttcctgacaaagac
cttcaccaatacgatgtatctataacgcctgaggttacttcacgtggtgtcaatcgtgct
gtcatgggagagcttgtaacgctgtatagacaatcccaattgggtgggcgtctacctgca
tatgatggaagaaagagcctttatacagctggacctctgccatttacttctaggacattt
gaaattaccttgcaagatgaggaagatagtcttagtggtggccaaggtgggcaaaggcgc
gagagagtatttagggtggtgatcaaatttgctgcccgtgctgatctccaccatttggct
atgttcctagctggaaggcaagcagatgctcctcaagaagctcttcaagtgcttgacatt
gtactacgtgaattgcctactgcgaggtattctcctgttggtagatcattttattctccc
gacttagggagacgtcagcaacttggtgagggtttggaaagttggcgcggtttttaccaa
agcataaggccaactcagatgggcctttcactgaatatcgatatgtcatcaactgcgttt
atcgagcctctccctgtgattgattttgttgcccagcttcttaacagagatatctcagtt
agaccattgtctgattctgatcgcgtgaagatcaaaaaagccctgagaggtgtgaaggtc
gaggtcacgcaccgaggaaacatgcgcagaaaatatcgtatctctggcctcacttcacaa
gcaacaagagagctatcattccctgttgatgatcgtggtaccgtgaagactgtagtgcaa
tattttatggagacttatggttttagtattcaacacaccactttaccttgcttgcaagtg
ggcaatcagcaaagaccaaactatctgcctatggaagtctgtaagattgttgaaggacag
cgttactcaaagcgactcaatgagaaacaaatcactgctctgctgaaagtgacctgtcag
cgccctcaagagcgtgagctggacatcttgcagactgtgcatcacaatgcatactatgaa
gacccatatgcacaggaatttggtataagaattgatgaacgtcttgcagcagttgaagct
cgtgttctgccaccaccaaggcttaaataccatgatagtggccgagagaaggatgtcctg
ccaagggttggccaatggaacatgatgaataagaaaatggttaatggtggtagagtcagc
aactgggcgtgcattaacttttctcggaatgtgcaagatagtgctgctaggggcttctgt
catgagctggctatcatgtgccaaatatctggaatggactttgctcttgagcctgtgctg
ccaccactgactgcaaggccagagcatgttgagagagcattaaaggcacgctatcaagat
gcgatgaacatactgagaccccagggcagggaacttgacctgctgattgtaatactgcct
gacaataatggttctctttatggggatctcaagagaatctgtgagactgatcttggattg
gtctcccagtgttgcttgactaagcatgtttttaagatgagcaagcagtatcttgcaaat
gttgcactcaaaataaatgttaaggttggtggaaggaatactgtacttgtagatgctttg
acaaggagaatcccccttgtcagtgacagaccaactattatatttggtgctgatgttacc
catccccatcctggagaagactccagtccttccattgcagctgttgttgcttctcaagac
tggcctgaggtcaccaagtatgctggtctagtgagtgctcaagcccatcgccaggagctg
attcaggatcttttcaaagtatggcaagatccacaaagagggacagtaaccggtggcatg
atcaaggaacttctcatttcttttaagagggcaactggacagaaacctcagaggatcata
ttctacagggatggtgtcagtgaggggcagttctatcaagtattgctgtatgaacttgat
gccatcagaaaggcctgtgcatccttggagcccaattaccagcctccagttacttttgtg
gtagttcagaagcgacatcacactaggttgtttgctaataaccacaatgatcagcgcact
gttgatagaagtggaaacatactgcctggtaccgtggttgattcaaagatttgccatcct
actgagtttgatttctacctgtgtagccatgctggcattcagggaacaagccgccctgct
cattatcatgtcctgtgggatgagaacaagtttacggctgatgagctgcagactctgaca
aacaacctgtgctacacatatgctaggtgcacccgctctgtgtcaattgtgcctccggca
tactatgctcatctggcagccttccgagctcgcttctacatggagccagatacctctgac
agcgggtcaatggcaagtggcgcccgtggccctccaccaggtggggcacgcagcagcagg
gctgcgggaagtgttgctgttaggcccctgcccgctctcaaggagaacgtgaagcgtgtc
atgttttactgctga
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integrated database retrieval system
