KEGG   Setaria viridis (green foxtail): 117866178
Entry
117866178         CDS       T07951                                 
Name
(RefSeq) target of rapamycin complex subunit LST8
  KO
K08266  target of rapamycin complex subunit LST8
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs04136  Autophagy - other
svs04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:svs00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    117866178
   04136 Autophagy - other
    117866178
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:svs04131]
    117866178
Membrane trafficking [BR:svs04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    117866178
   mTORC2 complex
    117866178
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WDR55 WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_CAF1B_HIR1 Beta-prop_WDR41 WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_NOL10_N Beta-prop_DCAF4 Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st ASA1 CFAP251_N Beta-prop_HPS5 WD40_RFWD3 NBCH_WD40 Beta-prop_Vps41 Beta-prop_Aladin Beta-prop_VPS8 Beta-prop_RIG_2nd Beta-prop_NWD2_C Beta-prop_ACSF4 Beta-prop_IFT140_2nd Beta-prop_SCAP Beta-prop_WDR19_1st PAC11 Beta-prop_NUP159_NUP214 Beta-prop_DCAF12 Beta-prop_SPT8 PROPPIN Beta-prop_IP5PC_F SHKBP1_KCTD3_C Beta-prop_RIG_1st CFAP43_N Beta-prop_WDR35_TULP_N Beta-prop_WDR19_2nd DmsR_N KH_YLL032C_5th-like
Other DBs
NCBI-GeneID: 117866178
NCBI-ProteinID: XP_034606222
LinkDB
Position
8:32338350..32341964
AA seq 316 aa
MAQPSVILATASYDHTIRFWEAKSGRCYRTIQYPDSQVNRLEITPDKRFLAAAGNPHIRL
FDVNSNSPQPVISYDSHTSNVMAVGFHCDGNWMYSGSEDGTVRIWDLRTGTCQREYESRA
AVNTVVLHPNQKELISGDQNGNIRVWDLAANSCSCELVPEVDTAVRSLTVMWDGSMVVAA
NNRGTCYVWRLLKGTQTITCFEPLHKLQAHDGYILKCLLSPEFCDPNRYLATASSDHTVK
IWNVDGFKLEKTLVGHQRWVWDCVFSVDGAYLITASSDTTARLWTMSTGEAIRVYQGHHK
ATVCCALHDGAESAPS
NT seq 951 nt   +upstreamnt  +downstreamnt
atggcgcaaccttctgtcatcctagcaaccgcaagttatgatcacacaatcagattttgg
gaagccaagagtggtcgctgttaccgcacgattcaataccctgactctcaagttaatcgc
cttgagataaccccagacaagagatttttagctgctgctggcaatcctcatatccgcctt
tttgacgtcaactcaaatagccctcaaccggtaattagctatgattcgcatactagtaat
gtgatggccgtgggattccattgtgatggcaattggatgtactctggctctgaggatggc
actgtgagaatctgggatttacgaactggcacttgtcagcgagaatatgaaagtcgcgca
gctgtcaacactgtagtcctacacccaaatcagaaagaactgatatctggtgatcagaat
ggtaacattcgtgtgtgggatttagctgctaactcatgcagctgtgagttggtaccagag
gttgatactgctgtaagatctctgacagtcatgtgggatgggagtatggtggttgctgca
aataaccgtgggacatgttatgtttggcggctgcttaagggtactcagacaattacctgc
tttgaacctctacacaaattgcaagcccatgatggctacattctgaagtgcctgctttca
ccagaattttgtgaccctaacaggtatctcgccacagcatcatctgaccacactgtaaag
atttggaatgtcgatggcttcaagctggaaaaaactttagtcggccaccaacgctgggtc
tgggactgtgtgttctcggttgatggcgcttatctgataactgcttcttctgacaccacc
gcgaggctatggacgatgtcgactggggaggccatccgggtgtaccagggccatcacaag
gcgaccgtgtgctgcgctctccacgacggagccgaatcagccccttcgtaa

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