Setaria viridis (green foxtail): 117866195
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Entry
117866195 CDS
T07951
Name
(RefSeq) vacuolar protein sorting-associated protein 2 homolog 1
KO
K12191
charged multivesicular body protein 2A
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117866195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
svs04131
]
117866195
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117866195
Membrane trafficking [BR:
svs04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
117866195
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117866195
Exosomal proteins of other body fluids (saliva and urine)
117866195
Exosomal proteins of colorectal cancer cells
117866195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
HTH_6
Expansin_C
Baculo_gp41
Spc24
Cas9_a
Motif
Other DBs
NCBI-GeneID:
117866195
NCBI-ProteinID:
XP_034606245
LinkDB
All DBs
Position
8:complement(41158488..41160959)
Genome browser
AA seq
225 aa
AA seq
DB search
MSFIFGKKKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLINEIKKVAKQGQMGAVK
IMAKDLIRTRHQITKFYALKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP
ALQKIMQEFEMQNERMEMVSDVMNDAIDDALEGDEEEEETEELVNQVLDEIGIDVNSELV
KAPATAVAKPVAAGKVPAAQAEAAGGPDGGIDDDLQARLDNLRKM
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcatattcggcaagaagaagaccccagccgagctgctgcgggagaataagcgg
atgctggacaagtccatcagggagattgagagggagaggcagggcctgcagacccaggag
aagaagctcatcaacgagatcaagaaggtggccaagcagggacagatgggagctgtaaaa
attatggcaaaggacctcatccgcacaaggcaccagatcacaaagttttatgccctgaag
tcccagctacaaggtgtatctcttcgcattcagactttgaaatcaacacaagcaatgggt
gaagctatgaagggtgtcacaaaagccatgggacaaatgaacaggcagatgaacctgcct
gctctgcagaagataatgcaggagttcgagatgcaaaatgagaggatggagatggtcagt
gatgtgatgaacgacgccatcgatgatgcattggagggtgacgaggaggaggaagaaaca
gaagagctagtcaaccaagtcctcgatgaaattggcattgatgtcaactcagagcttgtg
aaggctcctgcaactgcggttgctaaaccggtggcagcaggcaaagttcctgctgctcaa
gctgaagctgcaggcgggccggatggcggaatcgacgacgacttgcaggcgcggcttgac
aacctgaggaagatgtga
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