Setaria viridis (green foxtail): 117866306
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Entry
117866306 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K09422
transcription factor MYB, plant
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
svs03000
]
117866306
Transcription factors [BR:
svs03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
117866306
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Rit1_C
HTH_CHD1_Hrp3
DUF4402
Motif
Other DBs
NCBI-GeneID:
117866306
NCBI-ProteinID:
XP_034606384
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Position
8:complement(39882979..39886130)
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AA seq
357 aa
AA seq
DB search
MEMVLQPQRAAGISGGCRPGPPRPAAAATAATAAMMAMPRAKREHEEMMEAADGAAAEVE
VEAEAELRRGPWTVDEDLTLINYIAEHGEGRWNALARAAGLKRTGKSCRLRWLNYLRPDV
KRGDFTADEQLLILDLHSRWGNRWSKIAAQLPGRTDNEIKNYWRTRVQKHAKQLNCDVNS
ARFKDAMRFLWMPRLAERAAAAQHQHHQQAAAAIVSGGAAVSTTLITVPEVMTMMMNNEN
DDDRSPCSAVTTATTTSSSSSHTSSESTARDAVPVGGGGGDDEWAAMQQQDQEFWSTASA
LQQLTAAGSGDHHHQLFQFQADLPLQDLTGWVQGFSDGVSPETTTQLWSLDDIWRMQ
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggagatggtgctgcagccgcagagggccgccgggatcagcggcgggtgccggcccggg
ccgccgaggccggccgccgccgccaccgccgccacggcggcgatgatggccatgccgagg
gcgaagcgggagcacgaggagatgatggaggccgcggatggcgccgcggcggaggtggag
gtggaggcggaggcggagctccggcgcgggccgtggacggtggacgaggacctgacgctc
atcaactacatcgccgagcacggcgaggggcgctggaacgcgctcgcgcgcgccgccggt
ctgaagcggacggggaagagctgccggctgcggtggctcaactacctgcggccggacgtg
aagcgcggcgacttcaccgccgacgagcagctgctcatcctcgacctccactcccggtgg
ggcaaccggtggtcgaagatcgcggcgcagctgccgggtcgtacggacaacgagatcaag
aactactggcggacgcgggtgcagaagcacgccaagcagctcaactgcgacgtcaacagc
gcccgcttcaaggacgccatgcgattcctctggatgccgcgcctcgccgagcgcgccgcc
gccgcccagcaccagcaccaccagcaagcggcggcggccatcgtctccggcggcgccgcc
gtctccaccaccctcatcacggtgccggaggtgatgacgatgatgatgaacaacgagaac
gatgacgaccgctccccctgcagcgcggtcaccaccgccaccaccacctcgtcctccagc
tcccacacgtcatccgaatccaccgcgcgcgacgccgtgccggtcggtggcggcggcggc
gacgacgagtgggcggcgatgcagcagcaggaccaggagttctggtccacggcgtccgcg
ctgcagcagctcaccgccgccggcagcggcgaccaccaccaccagctgttccagttccag
gccgacctgccgctgcaggacctcaccggctgggtgcagggcttctccgacggcgtctcg
ccggagaccaccacccagctctggagcctcgacgacatctggaggatgcagtga
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