Setaria viridis (green foxtail): 117866385
Help
Entry
117866385 CDS
T07951
Name
(RefSeq) tyrosine decarboxylase 1
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00350
Tyrosine metabolism
svs00360
Phenylalanine metabolism
svs00380
Tryptophan metabolism
svs00901
Indole alkaloid biosynthesis
svs00950
Isoquinoline alkaloid biosynthesis
svs00965
Betalain biosynthesis
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00936
Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
117866385
00360 Phenylalanine metabolism
117866385
00380 Tryptophan metabolism
117866385
09110 Biosynthesis of other secondary metabolites
00901 Indole alkaloid biosynthesis
117866385
00950 Isoquinoline alkaloid biosynthesis
117866385
00965 Betalain biosynthesis
117866385
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117866385
Enzymes [BR:
svs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
117866385
4.1.1.105 L-tryptophan decarboxylase
117866385
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117866385
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
117866385
NCBI-ProteinID:
XP_034606471
LinkDB
All DBs
Position
8:39409542..39411461
Genome browser
AA seq
494 aa
AA seq
DB search
MGSLPLEAMMPLNPDSFAGESSAVVDFLADYYRNVDKYPVMANTQPGTIRKLLPEAAPEL
GDSMDRILDDVQRDILSGLTHWQSPSFFAYFPANASTAGFAGEMLSAGLNVVPFVWTASP
VATELEQVVVDWMASLLGLPEHFHFKGGGGGVLHGSTCEAVVCTLAAARDRALSKLGHEG
ILKLVVYASDQTHATFQKGASIVGIPPANFRILRTSANSGYGLTATIVQRAIEEDVARGL
VPLYLCATVGTTGLGAIDRVRELGHVARRYGTWLHIDAAYAGSAAICPEFQGHLDGAELA
DSLSMNPHKWFLTNMDCCCLWVANPTTMTDALSTDPEYLKNVGTASKMAETVDYKDWQIA
LSRRFRAIKLWVVLRRYGAAGMRAHIRRHIQMAEWFEHVVAADERFEVVVPRNFSLVCFR
LRPRFMADKAVEALNRDLLAEVNASGRAFMTHFVVDDKFVIRLAVGGSMTEMRHVRAAWE
LLKEKANDLIATGC
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgggtagccttccacttgaagccatgatgccactgaaccccgattcattcgctggggag
tccagtgccgtggtcgacttcctcgccgactactaccgcaacgtcgataagtatccggtc
atggccaacacccagccagggaccatccgtaagcttcttccggaggcagccccggagttg
ggcgactccatggatcgcatactggatgatgtgcagcgggatatcctctccggcctcaca
cattggcagagccctagcttctttgcctatttcccggcgaatgcaagcaccgcagggttc
gccggggagatgttgtcggctggtctcaacgtcgtcccgttcgtctggacggcgtcaccg
gtggccactgagctggagcaggtcgtggttgactggatggctagcctcctcggcctaccg
gagcacttccacttcaagggaggaggaggcggtgtcctgcatgggagcacgtgcgaggcg
gtggtgtgcactctcgctgccgcgcgcgaccgtgcactcagcaagctcggacatgagggc
atcctcaagcttgtcgtgtatgcctcggaccagacccacgcaaccttccagaagggcgcg
agcatcgtcggcatccctccagcaaacttccgcatcctgcggacttcggcaaactcggga
tacggcctgaccgccaccatcgtccaaagagcaatcgaggaagacgtcgcccgcgggctg
gttcccctttacctctgcgccaccgtcggcactactggtctgggggccattgaccgagtg
cgcgagctcggccatgttgcccggcgttatggaacctggctgcacatcgacgcagcctac
gccggaagcgcagccatttgcccggagttccaaggtcacctcgacggtgccgagctcgcg
gactcgctgagcatgaacccacataagtggttcctcaccaacatggactgctgctgcctc
tgggtggcgaaccctaccaccatgaccgacgcactgtccactgacccggagtacctcaag
aatgtcggcaccgcgtctaagatggcggaaacggtcgactacaaggactggcagatcgcg
ctgtcacgccgcttccgtgccatcaaactctgggtggtgctacggcgctatggagcggcg
ggaatgcgcgcgcacatacggaggcacatccagatggcagagtggttcgagcacgtcgtg
gcggcggacgagcggtttgaggtcgtggtgccaaggaacttctccttggtgtgcttccgc
ctccgcccgcggttcatggcggataaagctgtggaggccctgaaccgcgacctcctcgca
gaggtgaatgcaagcggccgggcgttcatgacgcacttcgtcgtggacgacaagtttgtg
atccgcctagccgtgggtgggtcaatgacagagatgcggcacgtccgggccgcgtgggag
cttctcaaggagaaggccaacgacttgatcgccaccggttgttag
DBGET
integrated database retrieval system