Setaria viridis (green foxtail): 117866447
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Entry
117866447 CDS
T07951
Name
(RefSeq) tyrosine decarboxylase 1
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs00350
Tyrosine metabolism
svs00360
Phenylalanine metabolism
svs00380
Tryptophan metabolism
svs00901
Indole alkaloid biosynthesis
svs00950
Isoquinoline alkaloid biosynthesis
svs00965
Betalain biosynthesis
svs01100
Metabolic pathways
svs01110
Biosynthesis of secondary metabolites
Module
svs_M00936
Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
117866447
00360 Phenylalanine metabolism
117866447
00380 Tryptophan metabolism
117866447
09110 Biosynthesis of other secondary metabolites
00901 Indole alkaloid biosynthesis
117866447
00950 Isoquinoline alkaloid biosynthesis
117866447
00965 Betalain biosynthesis
117866447
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svs04147
]
117866447
Enzymes [BR:
svs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
117866447
4.1.1.105 L-tryptophan decarboxylase
117866447
Exosome [BR:
svs04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117866447
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Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
117866447
NCBI-ProteinID:
XP_034606546
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Position
8:39448486..39450351
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AA seq
494 aa
AA seq
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MGSLPLEAMMPLNPDSFAGESSAVVDFLADYYRNVDKYPVMANTQPGTIRKLLPEAAPEL
GDSMDRILDDVQRDILPGLTHWQSPSFFAYFPANASTAGFAGEMLSAGLNVVPFVWTASP
VATELEQVVVDWMASLLGLPERFHFKGGGGGVLHGSTCEAVVCTLAAARDRALSKLGHEG
ILKLVVYASDQTHATFQKGASIVGIPPANFRILRTSANSGYGLTATIVQRAIEEDVARGL
LPLYLCATVGTTGLGAIDRVRELGHVARRYGTWLHIDAAYAGSAAICPEFQGHLDGAELA
DSLSMNPHKWFLTNMDCCCLWVANPTTMTDALSTDPEYLKNVGTASKMAETVDYKDWQIA
LSRRFRAIKLWVVLRRYGAAGMRAHIRRHIQMAEWFEHVVAADERFEVVVPRNFSLVCFR
LRPRFMADKAVEALNRDLLAAVNASSRAFMTHFVVDDKFVIRLAVGGSMTEMRHVRAAWE
LLKEKANDLIATGC
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgggtagccttccacttgaagccatgatgccactgaaccccgattcattcgctggggag
tccagtgccgtggtcgacttcctcgccgactactaccgcaacgtcgataagtatccggtc
atggccaacacccagccagggaccatccgtaagcttcttccggaggcagccccggagttg
ggcgactccatggatcgcatactggatgatgtgcagcgggatatcctccccggcctcaca
cattggcagagccctagcttctttgcctatttcccggcgaatgcaagcaccgcagggttc
gccggggagatgttgtcggctggtctcaacgtcgtcccgttcgtctggacggcgtcaccg
gtggccactgagctggagcaggtcgtggttgactggatggctagcctcctcggcctaccg
gagcgcttccacttcaagggaggaggaggcggtgtcctgcatgggagcacgtgcgaggcg
gtggtgtgcactctcgctgccgcgcgcgaccgtgcactcagcaagctcggacatgagggc
atcctcaagcttgtcgtgtatgcctcggaccagacccacgcaaccttccagaagggcgcg
agcatcgtcggcatccctccagcaaacttccgcatcctgcggacttcggcaaactcggga
tacggcctgaccgccaccatcgtccaaagagcaatcgaggaagacgtcgcccgcgggctg
cttcccctttacctctgcgccaccgtcggcactactggtctgggggccattgaccgagtg
cgcgagctcggccatgttgcccggcgttatggaacctggctgcacatcgacgcagcctac
gccggaagcgcagccatttgcccggagttccaaggtcacctcgacggcgccgagctcgcg
gactcgctgagcatgaacccacataagtggttcctcaccaacatggactgctgctgcctc
tgggtggcgaaccctaccaccatgaccgacgcactgtccactgacccggagtacctcaag
aatgtcggcaccgcgtctaagatggcggaaacggtcgactacaaggactggcagatcgcg
ctgtcacgccgcttccgtgccatcaaactctgggtggtgctacggcgctatggagcggcg
ggaatgcgcgcgcacatacggaggcacatccagatggcagagtggttcgagcacgtcgtg
gcggcggacgagcggtttgaggtcgtggtgccaaggaacttctccttggtgtgcttccgc
ctccgcccgcggttcatggcggataaagctgtggaggccctgaaccgcgacctcctcgca
gcggtgaatgcaagcagccgggcgttcatgacgcacttcgtcgtggacgacaagtttgtg
atccgcctagccgtgggtgggtcaatgacagagatgcggcacgtccgggccgcgtgggag
cttctcaaggagaaggccaacgacttgatcgccaccggttgttag
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