Setaria viridis (green foxtail): 117866542
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Entry
117866542 CDS
T07951
Name
(RefSeq) protein HEAT STRESS TOLERANT DWD 1
KO
K14848
ribosome assembly protein RRB1
Organism
svs
Setaria viridis (green foxtail)
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svs03009
]
117866542
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117866542
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40
WD40_Prp19
WDR55
Beta-prop_EML_2
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_WDR19_1st
CAF1C_H4-bd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_EML
NBCH_WD40
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
WDR90_beta-prop_4th
WD_LRWD1
Beta-prop_DCAF12
Rrn6_beta-prop
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
117866542
NCBI-ProteinID:
XP_034606666
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Position
8:332441..336473
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AA seq
475 aa
AA seq
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MGRTIKKVKSKKTKKVEASSSSNPAVASGPAKVWQPGVDALEDGEELQFDPEAYNYLRGF
SIGWSCLSFDVVRDQLGLVRSEFPHTFYGVAGTQAEKAPWNYIGIFKLSNISGKKREPIP
ASAVDGDTDVDSDSSSDEEDEEINEDTKPVLHLKKVAHAGCVNRIRSMTQKPHLCATWGD
TGHVQVWDLSSFLNSLAESGAPAPKEDDIIHKHLPVKVFSGHKDEGYAIDWSPLVTGRLV
SGDCNKCIHLWEPTPTNWNVDANPFVGHSASVEDLQWSPTEADIFASCSVDGTIAIWDIR
TGKKPRMSVKAHKTDVNVISWNRLASCMIASGCDDGSFSVRDLRSIQEDSLVAHFEYHKK
AITSIEWSPHEASSLAVTSEDHQLTIWDLSLERDAEEEAEFRAKMKEQANAPEDLPPQLL
FVHQGQRDLKELHWHPQIPSMIISTAIDGFNVLMPSNIDTTIPGNTDAAMASAEP
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcaccattaagaaggtcaaatccaagaagaccaagaaagttgaagcttcctcg
tcatctaatcctgcggttgcctctggtccggccaaggtctggcaaccgggtgtagatgca
ctggaagatggggaggagctccagtttgatcctgaggcttacaattatctccgagggttt
agcattggatggtcttgcttgagttttgatgttgtgcgcgatcaacttggactcgtccga
tcagagttcccccatacattctatggtgttgctggaacacaggctgagaaggctccatgg
aattatattggcattttcaagctttctaacataagtgggaagaagcgggaacctatacca
gcttcagcagttgatggtgacactgatgtggatagtgacagcagcagtgatgaagaagat
gaagaaattaatgaggatacaaagcctgtcctacatctaaaaaaggtggcccacgcgggg
tgtgtaaatcggatacgctcaatgactcaaaaaccacatctatgtgctacgtggggagat
actggtcatgttcaggtgtgggacttgagctccttccttaattctttagcagagtcaggg
gcacctgcacccaaggaagatgacataatccacaaacacttacctgtgaaagtatttagt
ggccataaagatgagggatatgcaattgattggagtccgcttgttactggaagacttgtt
tctggtgactgcaataagtgcattcacctgtgggagccaactccaaccaactggaacgta
gatgcaaatccatttgttggacactctgcaagtgttgaagatcttcagtggagtcccaca
gaagccgacatatttgcctcttgttctgtggatggtactatagcaatatgggatatacgt
acagggaagaaacctcgtatgtctgtcaaggctcataaaactgatgtgaatgttatctca
tggaataggcttgctagctgcatgatagcttcagggtgtgatgatggcagtttctcagtt
cgtgatcttagatcaattcaggaggactcattggtagcacattttgagtaccacaagaaa
gcaattacatctatcgagtggagtccacatgaagcatcatcattagctgtaacatccgaa
gatcatcaactcacaatttgggacctttcattggaaagagatgcagaagaggaagccgag
ttcagagcgaagatgaaagagcaggcaaatgcacctgaagatttacccccacaacttctc
tttgttcatcagggccagagagatttgaaagagctgcattggcacccacagataccatcg
atgatcatatcaacagcaattgacggcttcaatgtgttgatgcccagcaacattgataca
accattcctggcaacactgatgcagccatggcatctgctgagccatag
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