Setaria viridis (green foxtail): 117866692
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Entry
117866692 CDS
T07951
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.13
KO
K14487
auxin responsive GH3 gene family
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
117866692
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
117866692
NCBI-ProteinID:
XP_034606852
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Position
8:27639014..27644666
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AA seq
677 aa
AA seq
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MDLAMSTTTTSTSPAPDHDRGHRLPSSTPFAVSPPASPAMPTPPPPSLPPTIPACDPHDG
PASLQLIEDLTTHAGAIQRRVLGEILAMNAGTDYVRGFLGADADAEARSVGELAAAFKAR
VPVVEYEDVKPYIERIANGAPSSLISSKTITELLTSSGTSGGQPKLMPSTEEELDRKTFL
YNLLVPVMNKYVAGLDEGRCMYLLFVKPEITTASGLVARPVLTSYYKSRHFRDRPDSPYT
RYTSPNEAILCPDSAQSMYAQLLCGLARRGEVLRVGAVFASAFLRAVKFLEGHWRALCDD
IREGRVDAERVADRACREAAARVVARPDPELADAVAAECAAPSWRGIVRRLWPRTKYIDV
IVTGSMAQYIPLLEFYGGGLPLVSTMYASSECYFGINLRPLDRPEDVAYTLLPNMCYYEF
IKVEKDGEDVRDGEVVDLVDVEIGGYYELVVTTFTGLYRYRVGDILQVSGFHNAAPQFRF
VHRRNVVLSVDTDKTSEDDLLRAVTAAKRLLVPLGGAILSEYTAYADTASIPGHYVLFWE
LTPPPLPTSDDDDAVARVMAACCAEVEAGLDAVYRRCRSRDRSVGPLEIRVVCPGAFDAL
MDLCVSHGSSVNQYKTPRCIKHPDAIAVLEARVVGRFFSDAVPHWEPFQVNAAAAAATGA
DAAAGATAASSNEGAPA
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggatctagcaatgtcaaccacgacgacgtccacgtccccagcgcccgaccatgaccgt
ggtcaccgcctcccgtcctcaacccccttcgccgtctcgccaccagcatcgccggcaatg
ccaacgccaccgccgccatctctgccgcctacgatcccggcctgcgacccgcacgacggg
ccggcgagcctgcagctcatcgaggacctgaccacccacgccggcgccatccagcggcgc
gtcctcggcgagatcctcgccatgaacgctggcacggactacgtccgcggcttcctcggc
gccgacgccgacgccgaggcgcgcagcgtcggcgagctcgccgccgcgttcaaggcgcgc
gtgcccgtcgtggagtacgaggacgtcaagccgtacatcgagcgcatcgccaacggcgcc
ccctcgtcgctcatctcctccaagaccatcaccgagctcctcacgagctccggcacttcc
ggcgggcagccgaagctgatgccgtcgacggaggaggagctcgaccgcaagaccttcctc
tacaacctcctcgtccccgtcatgaacaagtacgtggcagggctggacgaagggaggtgc
atgtacctgctgttcgtgaagccggagatcacgacggcgtcggggcttgtggcgcggccg
gtgctgacgagctactacaagagccgccacttccgggatcgcccggacagcccgtacacg
cggtacacgagcccgaacgaggcgatcctgtgcccggacagcgcgcagagcatgtacgcg
cagctgctctgcggcctcgcccgccgcggcgaggtgctccgcgtcggcgccgtcttcgcc
tccgccttcctccgcgccgtcaagttcctagagggacactggcgcgcgctctgcgacgac
atccgcgagggtcgcgtcgacgccgagcgcgtcgccgaccgggcctgccgggaggctgca
gccagggtcgtggcgcggccggacccggagctcgccgacgccgtcgccgccgagtgcgcg
gcgccgtcgtggaggggcatcgtgcggcggctgtggccgaggaccaagtacatcgacgta
atcgtgacggggtccatggcgcagtacatcccgctgctggagttctacggcggcggcctg
ccgctagtgtcgacgatgtacgcgtcgtccgagtgctacttcggtatcaacctcaggccg
ctggaccggccggaggacgtggcgtacacgctgctgccgaacatgtgctactacgagttc
atcaaggtggagaaggacggcgaggatgtccgggacggtgaggtggtggacctcgtcgac
gtcgagatcggcggctactacgagctcgtcgtcacaaccttcacaggcctgtaccggtac
cgcgtgggcgacatcctgcaggtgtcggggttccacaacgcggcgccgcagttccgattc
gtgcaccgccgcaacgtcgtgctcagcgtcgacaccgacaagacctccgaggacgacctc
ctccgcgccgtcaccgccgccaagcgcctcctcgtacccctcggcggcgccatcctctcc
gagtacacggcctacgccgacaccgcctccatcccgggccactacgtcctcttctgggag
ctcaccccgccgccgctgcccacctccgacgacgacgacgccgtggcccgcgtcatggcg
gcgtgctgcgccgaggtggaggccgggctggacgccgtgtaccggcggtgccggagccgc
gaccggtccgtgggcccgttggagatccgcgtggtgtgccccggcgccttcgacgcgctc
atggacctctgcgtctcgcacggctcctcggtgaaccagtacaagacgccccgctgcatc
aagcaccccgacgccatcgccgtcctggaggcgcgcgtcgtcggaaggttcttcagcgac
gccgtgccgcactgggagccgttccaggtcaacgccgccgccgccgccgccacgggtgca
gacgccgccgccggcgccaccgccgccagctcaaacgaaggggcgccggcttaa
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