Setaria viridis (green foxtail): 117867065
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Entry
117867065 CDS
T07951
Name
(RefSeq) ubiquitin C-terminal hydrolase 12 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117867065
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
svs01002
]
117867065
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
svs04121
]
117867065
Enzymes [BR:
svs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117867065
Peptidases and inhibitors [BR:
svs01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117867065
Ubiquitin system [BR:
svs04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117867065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
Malt_amylase_C
Nitroreductase
Motif
Other DBs
NCBI-GeneID:
117867065
NCBI-ProteinID:
XP_034607285
LinkDB
All DBs
Position
8:complement(30692093..30707881)
Genome browser
AA seq
1119 aa
AA seq
DB search
MVTPAPTAGQEDEEMLVPHQEVAAADADAAQPMEVVAQTEVASTAESQPAEDPQTSRFTW
TIDNFTRFNGKKQYSEVFVVGGFKWRVLIFPKGNNVDHFSMYLDVADSANLPYGWSRYAQ
FSLAIVNQIQPKYTIRKDTQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVVVEAEV
AVRRMVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPS
GSIPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEGKMKE
TVVEGTIEQLFEGHHINYIECINVDYKSNRKESFYDLQLDVKGCRDVYASFDKYVEVERL
EGDNKYHAENHGLQDAKKGVLFLDFPPVLQLQLKRFEYDYMRDTNVKINDRYEFPLQLDL
DRDDGKYLAPDADRSTRNLYALHSVLVHSGGVHGGHYYAFIRPTLSEQWYKFDDERVTKE
DAKKALEEQYGGEEELPQVNPGFNNAPFKFTKYSNAYMLVYIRESDKEKIMCTVDEKDIA
EHLRVRLKKEQEDKEHKKKEKAEAHLYTIIKVARDEDLKQQIGKDIYFDLVDHEKVRNFR
IQKQLPFSSFKEEVAKEYGIPVQFQRFWLWAKRQNHTYRPNRPLTPHEETQSVGQLREVS
NKAHNAELKLFLEVELGLDLQPLPPPEKGREDFLLFFKLYKPEKEELCFMGRLFVKALGK
PSDILAKLNEMAGFSPDQEIELYEEIKFEPNVMCEIIDQKLTFRSSQLEDGDILCFQKAP
RADHDTQVRYPDVPSFLEYVHNRQVVHFRSLEKPKDDDFSLELSKLHTYDDVVERVARQL
ELDDPAKIRLTSHNCYSQQPKPQPVKYRGVEHLLDMLIHYNQTSDILYYEVLDIPLPELQ
FLKTLKVAFHHPTKDEVVIHSIRLPKNSTIADVINDLKTKVELSSPNAELRVLEVFYHKI
YKIFPLLEKIENINDQYWTLRAEEIPEEEKNIGPNDRLIHVYHFTKDINQTQQIQNFGDP
FFLLVREGETLAEVKKRIKSKLQVSAEEFSKWKFAFISMNRPDYLQDSDVIAPRFQRREV
YGAWEQYLGMEHTDTAPKRAYTVNQQNRHAYEKPVRIYN
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggtgactcctgctcccactgccgggcaggaggacgaggagatgctcgtgccccaccag
gaggttgccgctgccgatgcagacgcagcccagcccatggaagtggtggcacagacagag
gtggcgagcacagcggagagccagccagcggaagatccgcagacatcgcggttcacgtgg
acaatcgataacttcacccgctttaatgggaagaagcagtactcagaggtttttgtcgtt
ggcgggttcaaatggcgtgtgctgattttccccaaggggaacaatgtggaccacttctca
atgtacttggatgttgctgactcagccaacctcccgtatggttggagccgctatgctcag
tttagcctggctattgtaaaccagatccagccaaagtatacgatacgcaaagatacccaa
catcaatttaatgctcgtgagagtgattggggtttcacatcttttatgcctttaagtgag
ctctatgatccaagtagaggttacctcgtgaatgatactgttgttgtggaggccgaggtt
gctgtccgcagaatggttgactattggacgtatgactcaaaaaaggaaacgggctatgtg
ggtctgaaaaaccaaggggctacctgttatatgaactctcttttacaaacactgtaccac
ataccgtacttcaggaaggctgtgtatcatatgccaaccactgaaaatgacatgccatca
ggaagtattcccttggcgctgcagagccttttctacaagctccagtacagtgacagtagt
gtagctacaaaagagctgaccaaatcttttggatgggacacatatgattctttcatgcaa
catgatgtacaagagctcaacagagtcctctgtgagaaacttgagggcaaaatgaaggaa
actgttgtagaaggaacaattgagcaattatttgaaggtcatcacatcaattacattgag
tgtataaatgttgactataaatctaaccgcaaggagtccttttatgatcttcaacttgat
gtcaaaggttgtcgtgacgtgtatgcgtcgtttgataaatatgttgaagttgagcgttta
gagggtgataacaagtatcatgcagagaatcatggtctacaggatgcaaagaagggtgtt
ctcttccttgattttcctcctgttttgcaactccagctgaaacgctttgagtatgattat
atgagagataccaatgttaagattaatgatcgctatgagttccctctgcaacttgatctg
gatagagatgatggcaaataccttgctccagatgcagatcgaagtacaagaaacctctat
gctcttcacagtgttcttgttcatagtggtggggtacatggcggtcactactatgcattc
atacggccaactctatctgagcaatggtacaaatttgatgatgagcgtgtaacaaaagaa
gatgctaagaaggcccttgaagaacaatatggcggcgaggaagagttgccacaagtaaac
cctggcttcaacaacgccccgtttaaattcacgaagtattcaaacgcgtatatgcttgtt
tatattcgtgagagtgacaaggagaaaatcatgtgtactgttgatgaaaaggacatcgct
gagcatttaagggtaaggttgaagaaagaacaagaagataaagaacacaaaaagaaagaa
aaagctgaagctcatctttataccattattaaggtggctcgagatgaggatttgaagcaa
caaattgggaaggatatatattttgacctggtggaccatgaaaaggtccgcaatttccga
atacagaagcaattgccgtttagttcgttcaaggaggaagttgccaaggagtatggcatc
ccagtgcagtttcagcgcttctggttgtgggctaagaggcaaaaccatacataccgccct
aatcgtccattgacccctcatgaggaaacacaatctgtggggcaactgagggaggtatca
aataaggcacacaatgctgagttgaagctgtttttggaagtagaacttgggctggatttg
cagcctctccctcctcctgagaagggcagggaagactttcttcttttcttcaaactgtac
aaaccagaaaaggaagaactttgttttatggggaggctctttgtgaaggccttgggcaaa
ccttcagacatcctggcaaaactaaatgaaatggctggattttctccagatcaggaaatt
gagctttatgaggaaattaagtttgagccaaacgtgatgtgtgaaattattgaccagaaa
cttacttttcgttctagtcagcttgaagatggggacattctttgtttccaaaaagcacca
agagctgaccatgatacacaagtgcgatatccagacgttccttcatttttggagtatgtc
cataataggcaggttgtgcatttccggtctttggagaaaccaaaggatgatgatttttct
ttggaattgtcaaagcttcatacctatgacgacgttgttgagagagttgctcgtcaactt
gagttggatgatccagcgaaaattcggcttacatcccataattgctactctcagcaacct
aaaccgcaacccgtcaaatatcgaggtgtggagcatctgttggacatgctcatccattac
aatcagacatctgacatcttgtattatgaagtgctggatattccacttccagaattgcag
ttcctgaaaaccctgaaagttgcattccatcatcctacaaaggatgaggttgttattcat
agcatcaggcttccaaaaaatagcacaattgctgacgtgataaatgacttgaaaacaaag
gttgaactgtccagtcctaatgctgaactacgtgtgctagaagttttttaccacaagatc
tataagatctttccgctacttgagaagatagagaatataaatgatcaatattggacgcta
cgtgctgaagagattccagaagaggaaaaaaatataggcccaaacgatcggctaattcat
gtttatcacttcacaaaagatattaatcaaactcagcaaatccagaacttcggagaccct
ttttttctacttgttcgtgaaggtgagactttagcagaagtcaagaagcgcataaagagt
aaacttcaagtctccgccgaggaattttccaagtggaaatttgcttttatatcgatgaat
cggccagattacctccaggattcagatgttatagctccccgttttcagaggagggaggtc
tatggagcttgggagcaatatcttgggatggaacacactgatactgcaccaaaaagggcc
tatacagtgaatcagcagaaccgccatgcgtatgagaagccagtcagaatttacaattga
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integrated database retrieval system
