Setaria viridis (green foxtail): 140220064
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Entry
140220064 CDS
T07951
Name
(RefSeq) uncharacterized protein
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
svs
Setaria viridis (green foxtail)
Pathway
svs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
svs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
140220064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svs03009
]
140220064
Ribosome biogenesis [BR:
svs03009
]
Eukaryotic type
Pre-60S particles
GTPases
140220064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EF-G_D2
EFG_III
GTP_EFTU_D2
EFG_IV
Motif
Other DBs
NCBI-GeneID:
140220064
NCBI-ProteinID:
XP_072146698
LinkDB
All DBs
Position
9:complement(9831307..9834704)
Genome browser
AA seq
1041 aa
AA seq
DB search
MAAAERSGEAAAADPRRVRNTCILAHVDHGKTTLADHLVASCGDGLLHPKLAGRLRFMDY
LDEEQRRAITMKSAAVALRSRSGHRVSLIDSPGHIDFCSEVSSAARLSDSALILVDAVEG
VHIQTHAALRQAFVERLRPCLVLNKIDRLITELCLTPAEAYMRLHRIVSDVNSIYSALRS
HSYFSLLSALEDNPSSSSSSSTEDLPEDFEDDDDNEDAFQPLKGNVVFACALDGWGFRPQ
QFAELYARKVGVNPSAFLRGLWGPRYLDKKTGKVVGKKAIKSADPQPMFVEFVLSALWKM
YELVLNDGGESKRVKKLVENFQLKIPERELKNKDPKVVLQSIMSQWLPLSDAVMDMVVEC
TPDPVAAQGFRVTRLMPKREVTPEDAAGCPEVVAEAERVRRCVEACDVSVDAPVVVYVSK
MFAVPYKMLPLKGVNGELLNHHGASEPEECFMAFARVFSGVLHAGQKVFVLSPLYDPLKG
DAVQKHVQEVELQYLYEMLGQGLKPVASVGAGSVVAIQGLGHHILKSATLSSTKSCWPFS
SMMFQASPMLKVAIEPSNPADLGALVKGLKLLNRADPFVEYTVTQRGEHVLAAAGEIHLE
RCIKDLEERFAKVKLVVSDPLVSFKETIEGGGVGLVERMKAPQEFAERTTPNGRCTVRVQ
VLRLPNALTKVLEESEQLLGQIIEGKTAKGDGVLDPRLSQDDGNSAATLRQRMIDAIDSE
LEAISNQVDKEKLERYRKTWLGYLERIWSLGPWQVGPNLLLSPDAKSSDRAITIQDGRQG
ILVSGSSHVSERLGFVKESDTKDNSNLDNGESAADAPESLHLESLALRNNIVSGFQIAAN
AGPLCDEPMWGLAFIVEPYLFADGSDAANHFDQYNISSGQVITAVKEACRAAVLQNKPRI
VEAMYFCELTAPYDQSGSTYGVLNKRRARILKDEMQEGTSLFTVHAYLPVAESVGFSNEL
RSLTAGAASALLVLSHWEAIAEDPLFIPRTQDELEEFGDGSSIGPNLAKKLMNSVRRRKG
LHVEEKVVEHGTKQRTLAKKV
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggagagatccggcgaggcggccgcggcggacccgcgccgcgtccgcaac
acgtgcatcctcgcgcacgtggaccacggcaagaccacgctggcggaccacctggtggcg
tcctgcggggacgggctcctccacccgaagctcgccggccggctccgcttcatggactac
ctcgacgaggagcagcgccgcgccatcaccatgaagtccgccgccgtggcgctccgctcc
cggtccgggcaccgtgtcagcctcatcgactccccgggccacatcgacttctgctccgag
gtctcctccgccgcgcgcctctccgactcggcgctcatcctagtcgacgccgtcgagggg
gtgcacatccagacgcacgccgcgctgcgccaggccttcgtcgagcgcctccggccctgc
ctcgtgctcaataagatcgaccgcctcatcaccgagctctgcctcacccccgccgaggcg
tacatgcgtctccaccgcatcgtctccgacgttaactccatctactcagcgctgcgctcg
cactcctacttctccctcctctccgccctcgaagacaacccctcctccagctcgtcgtcc
tccactgaggatcttccagaggactttgaagacgacgatgacaatgaggacgcgttccag
cccctcaagggcaatgtcgtcttcgcctgcgcacttgatggctggggcttccgcccccaa
caattcgctgagctctacgccaggaaggtcggagtcaacccctccgccttcctcagagga
ttgtggggcccaagatatctcgataagaagacggggaaggttgtgggtaagaaagccatc
aagagcgcagacccacagcccatgttcgtggagtttgtgctgagtgccctgtggaagatg
tatgagctggtgctgaacgatggtggcgagagtaagagggtgaagaaattggtagaaaac
ttccaattgaaaattccagaacgggagctgaagaacaaagatccgaaggtggtgctgcag
tccataatgagccagtggctgccgctgtctgatgctgtgatggatatggtggtggagtgc
acgcctgaccctgttgctgctcaagggttcagggtcacacggcttatgccaaagagggaa
gttacaccagaagatgctgctggttgccctgaggttgttgcggaggcagagagggttcgg
aggtgtgttgaggcctgtgatgtaagtgtggatgcgccggtggtagtttatgtgtcaaag
atgtttgccgtgccatataagatgttgccattgaagggagtgaatggggaactgttgaac
catcatggtgccagtgagccagaggagtgctttatggcatttgcgagggtcttcagtggg
gtccttcatgcagggcagaaggtctttgtgctatcaccactgtatgatccattgaaaggg
gatgcagtgcagaagcatgtgcaggaagtggagctgcaatacttgtatgagatgcttgga
cagggcctgaagccagttgccagtgtgggtgctgggagtgttgttgcaatccagggcctt
gggcatcatatattgaagagcgccacattatcgtccacaaagagttgctggcccttctca
agtatgatgttccaggcgtccccaatgctcaaagttgcaattgagccttcaaatccagct
gatctgggagctcttgttaaagggctcaagcttcttaaccgggcagacccatttgtggag
tatactgttacacagaggggtgagcatgtccttgctgccgcaggtgagatacatttagaa
cggtgcataaaggatttggaggaaagatttgcaaaggtcaaattggtggtctcagacccc
cttgtttccttcaaagagacaattgaaggaggtggtgttggtttagtggagaggatgaag
gctccacaggagtttgctgagaggactactccaaatgggagatgcactgtgcgagttcag
gtcttgaggcttcccaatgctctaactaaggtccttgaggaaagtgaacaattgcttggt
caaataattgaggggaaaacagcaaaaggggatggtgtcttggatccaaggctttctcaa
gatgatggtaattctgctgcgacgcttaggcagcgtatgatcgatgccatagacagtgaa
ttagaagcaatttccaatcaagtggataaagaaaaacttgagaggtacagaaagacatgg
cttggatacctagaaagaatctggtcactaggtccgtggcaggttggtccaaatctcctc
ctctcgcctgatgcaaaatcaagtgatcgtgcgataaccatccaagatggaaggcaaggt
atacttgtgagtggtagttctcatgtctctgagagattggggtttgtgaaggaatctgat
accaaagataacagcaatcttgacaatggtgaatcagcagcagatgctcctgaatcattg
catctagagtctctggcactaaggaacaacattgtctcaggtttccagattgcggcaaat
gctgggcctttatgtgatgaacctatgtggggtctggcgtttattgttgagccttaccta
tttgcagacggctctgatgctgctaatcactttgatcaatacaacatttccagtggtcaa
gtaatcactgcggttaaagaagcatgccgagcagctgttcttcaaaacaaaccaaggatt
gttgaggcaatgtacttctgtgagttgaccgcgccatatgatcaatcaggttcaacttat
ggagttcttaataagaggcgagcaaggattctgaaagatgagatgcaagaaggaacctca
ttgttcacagtgcatgcttacttgccagtcgctgagagcgttgggttttcgaatgaactt
aggagtttaactgcaggtgcagctagtgctctgcttgttcttagccactgggaagccatt
gctgaggaccctctctttatcccaagaacgcaggatgagcttgaagaatttggagatggt
tcaagcattgggccaaaccttgctaaaaagcttatgaattctgttaggcggaggaaggga
ctgcatgtcgaagagaaagttgtggagcatggcacaaaacagcggacccttgctaagaaa
gtatag
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