Streptomyces vietnamensis: SVTN_04065
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Entry
SVTN_04065 CDS
T03586
Name
(GenBank) RNA polymerase subunit sigma
Organism
svt
Streptomyces vietnamensis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP
Sigma70_r2
HTH_24
HTH_AsnC-type
MarR_2
zf-HC2
Motif
Other DBs
NCBI-ProteinID:
AJF63745
UniProt:
A0A0B5HNR0
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Position
complement(942842..944467)
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AA seq
541 aa
AA seq
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MHSDERRTTALVEAARAGDADARDTLVRDHFPLVHNIVGRALDGHADTDDIVQETMVRAL
DGLTGLRDPSRFRSWLVAIAMNGIRRRWHERRRAPVPGLDRAADLADPAGDFTELTILRL
GLSGQRRDVARATRWLDEDDAELLALWWLEAAGELTRAELAEGLGVPPRHAAVRVQRMKE
RLDTGRAVVRALDALPPCPELTEILTAWDGRPSPLWRKRIARHLRTCAACTSRASGRSGL
APVEGLLVGIGLVPPLAVAASRTDGPAMEYTAHASSQPGASSGHGVSPGPGGGSRPGDPS
QPGASPGASGGSWPGDPSQPGMSPGPGASDAAGRWIPLRRAAVAGVAAVAVLGAVALLVP
PEPQARVRPDRPVAEPAATTAPATVSPSPVVTTAPAPTTAVPTPRRTPRPTPPPDPGEQV
TALVNRLRAKAGCAPLRTDPRLVEAARRYARDMVARGYYGHSSPEGEFADARITAAGYDW
SAWAENLARGAADPETVVEDWRSDAMHERNMIDCRYRDTGVASAPGPGGTIWVQKLAAPA
P
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcgacgagcgacgcaccacggcccttgtggaggcggccagggcgggtgacgcg
gacgccagggacacactggtccgcgaccactttccgctcgtccacaacatcgtcggccgg
gccctcgacggccacgccgacacggacgacatcgtccaggagacgatggtccgtgccctc
gacggcctcaccggcctccgcgacccctcccgcttccggtcctggctcgtcgccatcgcc
atgaacgggatacggcgccgctggcacgagcgccggcgggcgcccgtgcccggcctcgac
cgggccgcggacctcgcggacccggccggtgacttcaccgaactcaccatcctccgcctc
ggcctctccgggcagcgccgcgacgtggcccgcgcgacccgctggctcgacgaggacgac
gccgaactcctcgccctgtggtggctggaggccgccggcgagctcacccgcgccgagctc
gccgaaggcctcggcgtccccccgcggcacgccgccgtccgcgtccagcggatgaaggaa
cgcctggacaccggccgcgccgtggtccgcgccctggacgcgctgccgccgtgcccggag
ctcacggagatcctcacggcctgggacggccggccctccccgctctggcgcaagcggatc
gcccgccatctgcgcacctgcgccgcctgcacctcccgcgcgagcggccgcagcggcctc
gcccccgtcgagggcctcctcgtcggcatcggcctcgtcccgcccctggcggtcgcggcc
tcgcgcacggacggcccggcgatggagtacaccgcccacgcgtcctcgcagccgggcgcg
tcctccgggcacggcgtgtctccggggcccggcgggggctcccggcccggcgacccctcg
cagccgggcgcgtccccgggggccagcgggggatcctggcccggcgacccctcgcagcct
ggcatgtccccggggcccggcgcgtccgacgccgccgggcggtggatcccgctgcgccgc
gccgccgtcgccggggtcgcggccgtcgccgtcctcggggcggtcgccctcctcgtaccg
ccggagccgcaggcacgcgtcagaccggaccggcccgtcgccgagccggccgcgacgacc
gccccggccaccgtctccccgagcccggtggtcaccaccgcccccgcgccgacgaccgcc
gtccccacaccccggcgcaccccgcgcccgacgccgccccccgacccgggggagcaggtc
accgcgctcgtcaaccggctccgggcgaaggccggttgcgccccgctgcggaccgacccc
cgcctcgtcgaggcggcccgccgctacgcccgcgacatggtcgcgcgcggctactacgga
cacagcagccccgagggagagttcgcggacgcgcggatcaccgccgccggatacgactgg
agcgcctgggccgagaacctggcgcgcggcgcggccgacccggagaccgtcgtcgaggac
tggcggagcgacgcgatgcacgagcggaacatgatcgactgccggtaccgggacaccggc
gtggcgtcggcgcccggtcccggcggcacgatctgggtgcagaagctggccgcccccgct
ccctga
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