Streptomyces vietnamensis: SVTN_05055
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Entry
SVTN_05055 CDS
T03586
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
svt
Streptomyces vietnamensis
Pathway
svt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
svt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SVTN_05055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svt03400
]
SVTN_05055
Enzymes [BR:
svt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SVTN_05055
DNA repair and recombination proteins [BR:
svt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SVTN_05055
Prokaryotic type
SVTN_05055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AJF63890
UniProt:
A0A0B5HP50
LinkDB
All DBs
Position
complement(1172319..1172996)
Genome browser
AA seq
225 aa
AA seq
DB search
MTARPLNELVEPGWAEALSPVAGRIAAMGDFLRAEIAAGRTYLPAGQNVLRAFQQPFDDV
RVLIVGQDPYHTPGMAMGLSFSVAPEVRSLPPSLENIFRELHTDLGLPRPSNGDLTPWTR
QGVLLLNRALTTAPRKAGAHRGKGWEEVTEQAIRALAARGKPLVSILWGSDARRARPLLG
NLPVIESAHPSPMSADRGFFGSRPFSRANELLVSQGAQPVDWRLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcgcgacccttgaacgaactggtggagcccggctgggcggaggccctgagcccc
gtggcggggcgtatcgccgcgatgggcgacttcctgcgggcggagatcgccgcgggccgg
acgtacctgcccgccggacagaacgtgctgcgggccttccagcagcccttcgacgacgtg
cgggtcctgatcgtgggtcaggatccgtaccacacgccggggatggcgatggggctcagc
ttctcggtcgcgcccgaggtccgctcgctgccccccagcctggagaacatcttccgggag
ctgcacaccgacctcggtctgccccggccgtcgaacggcgacctgacgccgtggacccgc
cagggcgtcctgctgctcaacagggcgctgaccacggccccgcgcaaggcgggcgcccac
cggggcaagggctgggaagaggtgaccgagcaggccatccgcgcgctggccgcccggggc
aagcccctggtgtcgatcctctggggcagcgacgcccgcagggcccgcccgctcctcggc
aacctgccggtgatcgagtccgcgcacccctccccgatgtcggcggaccggggcttcttc
ggctcccgcccgttcagccgggcgaacgagctgctggtgagccagggcgcgcagccggtg
gactggcgcctgccctga
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integrated database retrieval system
