Streptomyces vietnamensis: SVTN_18275
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Entry
SVTN_18275 CDS
T03586
Name
(GenBank) type IV secretion protein Rhs
Organism
svt
Streptomyces vietnamensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
T7SS_signal
DUF6531
TEN_YD-shell
Tox-HNH-EHHH
RHS
WXG100
YL1_C
OCRE
Motif
Other DBs
NCBI-ProteinID:
AJF66048
UniProt:
A0A0B5I8S0
LinkDB
All DBs
Position
4101117..4105799
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AA seq
1560 aa
AA seq
DB search
MVDWGGWVDKGIDKIGDGIGAGIDKGKEFLGEGVDQATDMTGRILDAAGTHDWADAVEDW
GDKTASSLGAEVGEQQLGQTEQADELVHGKPEKIAESVKNLRDFQRAFDLVGGGMKKLDA
GHWKGAAADAFRSAFETLPTDWLQAADAMENAARALETYSHAIVSAQGKAREAIALYKEG
DADSKAATETYEKKVAAYKAASSTDSPLPDPGDFSDPGTAKRKRAQEILNDARKARDEAA
ESAKAAVGAALAHAPKEPTGRERVKAELMDYGVGTSIELAHFSGGVVKGGAGLVDFVRSV
NPTDVYNMTHPAEYYKGVNMTLAGLVSTVANPDRALKNAWDSAKGDPSEFLGRLLPELIG
SKGTGLVRGGVRAAVKNGTKHLPEVKKPGGVRGDQGKDPHTAGKTGRETKCKKDPIDIAT
GRMLLPQTDIALPGSLPLVFRRTFDSSRRSGRWFGPTWSSTVDQRLEIDSEGVVFSCDEG
SLLAYPHPAPGVPVMPTHGRQWPLDRVEDGYTITDPDSGTVRHFTDHSDELALLAQMDDR
NGRWIAFEYDESGAPTAIVHHGGYHLKLTTSEGHVTALHLADQEILRYGYTDGHLTEVTN
SSGRPLLFGCDEHGRITSWTDTNGSRFDYVYDDQDRCTYQSGTNGHLEATFTWDDVDPAT
GLRITTLTDGLGHTERHLINDRAQVVAEIDALGGVTRYAYDRHNRLLSRTDPLGHTARTT
YDDQGRPTVLERPDGRQARAEYDEHGFPIRLTGTDGNVTRQTFDERGNRTSVTAPSGART
EFAYDESGRLTSMTDPLGATTRLVVDARGLPVEVTDPLGAVTRYSYDAFGRTVQVTDPLG
AVTRLEWTVEGQPSKRTAPDGTVESWTYDGEGNCLSHTDALGGTTSFTYTDFDLLTSRTG
PDGVRYEFAHDSNLRLTRVTNPQGLTWDYAYDAAGRLVEETDFDDRTLGYAYDESGRLTS
RTNGLGQEISFERDSLGRIVRKDAEGAVSTYEYDVFDQLATATGPDATLARLRDRYGRLV
SETVNGRTLSFEYDAVGRRTGRTTPGGSKSTWSYDAAGRRTELTSSGRTLSFTHDALGRE
TSRRIGDFANLSSSFDTMGRLTAQEVTGGSGRRLQHRAYTYRADGGLIGITDELSGARRF
DLDQAGRVLAVHAHNWTERYAYDDAGNQTEASWPSTHPSHSSTGARAYTGTRITTAGSVR
YEHDAQGRIVLRQKTRLSRKPDTWRYEWDAEDRLTSVTTPDGTVWRYGYDPLGRRISKQS
PFETVHFTWDGATLCEQTTEDITLTWDHAGLRPLAQTERRTVPDSTDERFFAIVTDLVGT
PTELVSESGDVAWRTRATLWGTTTWTRDATAYTPLRFPGQYFDPESGLHYNHFRYYDPES
ARYLSPDPLGLAPAPNPATYVHNPHTWSDPLGLAPDGCPPKGELSNPFEKRVDAERAAFE
AAGVPYGESPLAEWTVVGDKNLKHVPGYIYSSDRAHWGHFRQFETENGSRVIVEHTHDPA
GTHFHAGKPKKPSDRSFVNFGWDNQKVIRPDGTNGYPENMERYLKINKEGGDHHFFYNGE
NT seq
4683 nt
NT seq
+upstream
nt +downstream
nt
atggtggactggggcggttgggtcgacaaggggatcgacaagatcggcgacggcataggc
gccggcatcgacaagggcaaggagttcctcggcgagggcgtcgaccaggcgaccgacatg
accggtcggatcctcgacgccgcgggtacgcacgactgggcggacgcggtcgaggactgg
ggtgacaagaccgcttcctccctgggcgcagaggtcggggagcagcagctcgggcagacg
gagcaggcggacgagctcgtccacggcaagccggagaagatcgccgagtcggtgaagaac
ctccgggacttccagagggcgttcgacctcgtcggcggcgggatgaagaagctggacgcc
ggtcactggaagggcgcggcggcggacgcgttccggtcggcgttcgagaccctgccgacc
gactggctgcaggccgccgacgcgatggagaacgcggccagggcgctggagacgtactcc
cacgcgatcgtgagcgcgcagggcaaggcgcgcgaggcgatagccctgtacaaggagggc
gatgcggactccaaggcggccaccgagacgtacgagaagaaggtcgccgcctacaaggcg
gcgagcagcaccgacagcccgctccccgaccccggggatttctccgaccccggcacggcc
aagcggaagcgcgcccaggagatcctgaacgacgcgcggaaggcgcgcgacgaggccgcg
gagtcggcgaaggcggcggtcggtgcggccctcgcccatgcgcccaaggagccgacgggg
cgcgagcgggtcaaggccgagctgatggactacggcgtcggcacgagcatcgagctggcc
cacttcagcggtggcgtcgtcaagggcggggccggcctggtcgacttcgtccgctcggtc
aacccgaccgacgtatacaacatgacccacccggcggagtactacaagggcgtcaacatg
acgctcgccggcctggtgtccacggtcgcgaacccggacagggcgctgaagaacgcctgg
gactcggcgaagggcgacccgtcggagttcctcggccggctcctgccggagctgatcggc
tcgaagggcaccggcctggtgcgcggaggcgtacgcgccgcggtgaagaacggcacgaag
cacctgccggaggtgaagaagccgggcggtgtccgcggggatcaggggaaggatccgcac
accgccggcaagacgggccgcgagacgaagtgcaagaaggacccgatcgacatcgcgacg
ggccggatgctgctgccgcagaccgacatcgcgctgcccggttcgctgcccctcgtgttc
cggcgcacgttcgactcctcgcgccgctcggggcgctggttcggtccgacgtggtcgagc
acggtggaccagaggctggagatcgattcggaaggcgtcgtcttcagctgcgacgagggc
agcctcctggcctatccgcatccggcgccgggcgtcccggtcatgcccacgcacggccgg
cagtggccgctggaccgggtggaggacggctacacgatcacggaccccgacagcggcaca
gtccggcacttcaccgaccacagcgacgaactcgcgctcctggcccagatggacgaccgc
aacggccgctggatcgcattcgagtacgacgagtcgggcgccccgacggcgatcgtccac
cacggcgggtatcacctgaagctcacgacgagcgaagggcatgtgaccgcccttcacctc
gcggaccaggagatcctgcgctacggctacacggacggccacctgaccgaggtcaccaac
tcctcgggcagacccctcctcttcggctgcgacgagcacggccgcatcacctcgtggacg
gacaccaacggaagccgcttcgactacgtctacgacgaccaggaccgctgcacgtaccag
tcgggcacgaacggccacctggaagcgacgttcacctgggacgacgtggacccggccacc
ggcctccgcatcaccaccctcaccgacggcctgggtcacaccgaacgccacctgatcaac
gaccgcgcgcaggtggtcgccgagatcgacgccctgggtggggtcacccgctacgcgtac
gaccgccacaaccgcctgctgtcgcggacggacccgctgggccacaccgcccgcaccacc
tacgacgaccagggccggccgacggtactggaacgcccggacggacgacaggcacgggcg
gagtacgacgagcacggcttcccgatacgcctcaccggcaccgacggcaacgtcacccgc
cagaccttcgacgaacgcggcaaccgcacgtcggtgacggccccttcgggcgcccggacg
gagttcgcgtacgacgagtcgggccggctgacgtcgatgacggacccactgggcgccacg
acgcgactggtcgtggacgcccgcggcctccctgtcgaggtcaccgacccactgggcgcg
gtcacccgctactcctacgacgccttcggccgcacggtccaggtcacggaccccctgggc
gcggtcacacgcctggagtggacggtcgaaggccagccatcgaaacgcactgccccagac
gggacggtggagtcctggacgtacgacggcgagggcaactgcctcagccacacggacgcg
ctgggcggcacgacgagcttcacgtacaccgacttcgacctgctgacctcccgcacgggc
ccggacggggtccgctacgagttcgcccacgactcgaacctgcgcctgacgagggtgacc
aatccccagggcctgacgtgggactacgcgtacgacgcggcgggccgactggtcgaggag
acggacttcgacgaccggactctgggctacgcgtacgacgagtcgggccgactcacctcc
cgcacgaacggcctcgggcaggagatcagcttcgagcgcgacagcctgggccgcatagtc
cgcaaggacgccgaaggtgcggtcagcacgtacgagtacgacgtcttcgaccagctggcg
accgcgaccggcccggacgcgacgctggcgcgcctccgggaccgctacggccgcctcgtc
tcggagaccgtgaacggccgcacgctctcgttcgagtacgacgccgtggggcgccgtaca
gggcggacgacaccgggtggttcgaagagcacgtggtcgtacgacgcggcgggccgccgt
accgaactgacctcgtcgggccgaacattgtccttcactcacgacgccctgggccgcgaa
acatcccgccgaataggcgacttcgcgaacctgtcgtcctcgttcgacacgatgggccgc
ctcaccgcgcaggaggtcacgggcggttcgggccgccgtcttcagcaccgcgcgtacacg
taccgcgcggacggcggcctcatcggcatcacggacgaactctctggcgcccgccgcttc
gacctggaccaggcgggacgagtgctggccgtccacgcccacaactggacggagcggtac
gcctacgacgacgccggcaaccagacggaggcgtcctggccgtcgacgcacccgtcccac
tcgtcgacgggggcacgtgcgtatacagggacgcggatcacgaccgcgggctccgtccgc
tatgaacacgacgcccagggccggatcgtcctacgccagaagacccgcctctcccgcaag
cccgacacctggcgctacgagtgggacgcggaagaccgcctgacctcggtgacgacaccg
gacggcacggtgtggcgctacgggtacgaccccctgggccgccgaatatcgaagcagtcc
cctttcgagacagtccacttcacctgggacggcgccactctctgcgagcagacgaccgag
gacatcaccctcacctgggaccacgcaggcctgcgccccctggcccagacggaacgccgc
acggtcccggactccaccgacgagcgcttcttcgccatcgtcaccgacctggtcggcacc
ccgacggaactggtctccgagtcgggcgacgtggcctggcgcacccgcgcaacgctctgg
ggcacgaccacatggacccgcgacgcaacggcctacaccccactccgcttcccgggccaa
tacttcgacccggaatcgggcctccactacaaccacttccgctactacgacccggaatcg
gcccgctacctctccccggaccctctaggcctcgccccggcccccaacccggcaacttac
gtccacaatccgcacacgtggagcgacccgctgggccttgcgcccgacgggtgccctccg
aagggcgagctttcaaacccgttcgagaagagagtcgacgcagaacgagcagccttcgaa
gctgctggtgttccatacggtgaatccccactggccgaatggaccgtggtcggcgacaag
aacctcaagcatgtccctgggtatatttattcaagcgaccgagctcactggggtcatttc
agacagttcgagaccgaaaatggatcccgcgtaatcgtggagcacacacacgaccccgct
ggaacgcacttccacgcaggaaagccgaagaaacctagcgatagatccttcgtgaacttc
ggatgggacaatcaaaaggtgatacgccccgacggcacaaacggctatcctgaaaacatg
gagaggtacctcaagataaacaaggaaggcggggatcaccatttcttctacaacggggaa
tga
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