Streptomyces vietnamensis: SVTN_19660
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Entry
SVTN_19660 CDS
T03586
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
svt
Streptomyces vietnamensis
Brite
KEGG Orthology (KO) [BR:
svt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svt03021
]
SVTN_19660
Transcription machinery [BR:
svt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SVTN_19660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
HTH_24
MarR
DUF7343
Motif
Other DBs
NCBI-ProteinID:
AJF66279
UniProt:
A0A0B5ID74
LinkDB
All DBs
Position
complement(4401734..4402648)
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AA seq
304 aa
AA seq
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MSTELGSSKVLTLTPVPVPTQTTAPTATDSTETAETAPPPMTVTPGALDTRTLSRSLFLR
LRALDDEGAAADSPERTYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAI
DRFDCERGVEFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKASDELAQKLDR
SPTVPELAAVLGVSEEDVVDGLAVGNAYTASSLDSPSPEDDGGEGSLADRLGYEDSALEG
VEYRESLKPLLAKLPPRERQIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLREG
LISD
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtccacagaactgggcagctcgaaggtgctcacgctcacgcccgttcccgtgcccacg
cagacgacggcgccgaccgcgaccgacagcacggagaccgcggagaccgcgccgccgccg
atgacggtcacgcccggagccctcgacacccgcaccctctcccgctccctgttcctgcgc
ctgcgcgccctcgacgacgaaggcgccgccgccgacagcccggagcggacctacgtccgc
gacaccctcatcgagctcaacctccccctcgtgcggtacgcggcggcccgcttccgctcc
cgcaacgagccgatggaggacatcgtccaggtcggcaccatcggcctgatcaaggcgatc
gaccgcttcgactgcgaacgcggcgtggagttcccgacgttcgcgatgccgaccgtcgtc
ggcgagatcaagcgtttcttccgcgacacctcctggtcggtccgcgtcccgcgccggctc
caggagctgcgcctcgccctcaccaaggccagcgacgagctcgcccagaagctcgaccgc
tcccccaccgtccccgaactcgccgccgtgctcggggtgtcggaggaggacgtcgtcgac
ggcctcgccgtcggcaacgcgtacaccgcctcctcgctcgactccccctcgcccgaggac
gacggcggcgagggctccctcgcggaccgcctcggctacgaggactcggccctcgaaggc
gtcgagtaccgcgagtcgctcaagccgctcctcgccaaactgccgccccgggagcggcag
atcatcatgctccgcttcttcgcgaacatgacgcagtcgcagatcggcgaggaggtcggc
atctcccagatgcacgtctcgcggctcctcacccgcaccctcgcccagctgcgcgagggc
ctcatctccgactga
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