Streptomyces vietnamensis: SVTN_19665
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Entry
SVTN_19665 CDS
T03586
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
svt
Streptomyces vietnamensis
Brite
KEGG Orthology (KO) [BR:
svt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svt03021
]
SVTN_19665
Transcription machinery [BR:
svt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SVTN_19665
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
MarR_2
GerE
NirdL-like_HTH
MarR
HTH_3
DUF134
HTH_24
DUF7343
HTH_31
HTH_37
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AJF69858
UniProt:
A0A0B5IJN5
LinkDB
All DBs
Position
complement(4402884..4403732)
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AA seq
282 aa
AA seq
DB search
MPASTAPQVPPQHEAGGAVDTPRPRPQSSRGADTRALTQVLFGQLKDLEPGTPEHHRVRG
ALIEANLPLVRYAAARFRSRNEPMEDVVQVGTIGLINAIDRFDPDRGVQFPTFAMPTVVG
EIKRYFRDNVRTVHVPRRLHELWVQVNGATEDLTTAHGRSPTTAEIAERLRIGEDEVLAC
IEAGRSYHATSLEAAQEGDGLPGLLDRLGYEDPALAGVEHRDLVRHLLVQLPEREQRILM
LRYYSNLTQSQISQELGVSQMHVSRLLARSFARLRSANRIEA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
gtgccggccagtacagcacctcaggtcccgccccagcacgaggcgggcggagccgtggac
accccgcgcccccggccccagagcagccgcggcgccgacacccgcgccctcacccaggtg
ctcttcgggcagctcaaggacctggagcccggcacccccgagcaccaccgggtgcgcggg
gccctcatcgaggccaacctgccgctcgtgcggtacgcggcggcccgcttccgctcccgc
aacgagccgatggaggacgtcgtccaggtcggcaccatcggcctcatcaacgccatcgac
cgcttcgaccccgaccgcggcgtgcagttccccaccttcgcgatgccgaccgtcgtcggc
gagatcaagcggtacttccgcgacaacgtccggaccgtgcacgtgccgcgccggctgcac
gagctctgggtccaggtgaacggcgccaccgaggacctgacgaccgctcacggccgctcc
cccacgaccgcggagatcgccgagcggctgcggatcggcgaggacgaggtgctcgcctgc
atcgaggccggccgctcgtaccacgccacctccctggaggccgcacaggagggcgacggg
ctgcccggactgctcgaccggctcggctacgaggaccccgccctggccggcgtcgagcac
cgcgacctcgtccgccacctgctcgtccagctgcccgaacgggagcagcggatcctgatg
ctgcgctactacagcaacttgacccagtcccagatcagtcaggagctcggcgtctcccag
atgcacgtgtcaaggctcctcgcccgcagcttcgcccgcttgagatccgcaaacaggatc
gaggcgtaa
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