Streptomyces vietnamensis: SVTN_21595
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Entry
SVTN_21595 CDS
T03586
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
svt
Streptomyces vietnamensis
Brite
KEGG Orthology (KO) [BR:
svt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svt03016
]
SVTN_21595
Enzymes [BR:
svt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
SVTN_21595
Transfer RNA biogenesis [BR:
svt03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
SVTN_21595
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AJF66584
UniProt:
A0A0B5IDY1
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All DBs
Position
4803138..4803722
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AA seq
194 aa
AA seq
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MRLFAAVVPPPGQLDELGRVVDRLHRMPGADRLRWTSRPGWHLTLAFMGEVDEELLPELR
VRMERAAHRTPPFSLRLHAGGHFGRRALWVGVAGDLDLLRLLAERSDAAARRAGVPMDEH
RRYQAHLTVGRARGDGVSLGSFVEELGGFEGARWRVGELALVRSNLPGGGVPGAQPRYET
VGTWPLEGREEQSG
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttttcgccgccgtcgtgcccccgccggggcagctggacgagctcggtcgcgtc
gtcgaccggctccatcggatgcccggtgcggaccggctccgctggacctcgcggcccggc
tggcacctcaccctggccttcatgggggaggtcgacgaggagctgctgcccgagttgcgg
gtgcggatggagagggccgcgcaccggacgccgccgttctcgctgcggctgcacgccggc
gggcacttcgggcggcgggccctgtgggtcggggtcgccggggatctggacctgctgcgg
ctcctcgccgagcggtccgacgccgccgcgcgccgggccggggtcccgatggacgagcac
cgccgctaccaggcgcacctgaccgtcggccgtgcgcggggggacggggtgtcgctcggt
tcgttcgtggaggagctcggcgggttcgagggcgcgcggtggcgggtcggtgagctggcg
ctcgtacggtcgaacctgccgggaggcggggtgccgggcgcgcagccccggtacgagacg
gtcggcacctggccccttgaggggcgggaggaacagtcgggttaa
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