Streptomyces vietnamensis: SVTN_22660
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Entry
SVTN_22660 CDS
T03586
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
svt
Streptomyces vietnamensis
Pathway
svt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
svt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SVTN_22660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svt03021
]
SVTN_22660
03400 DNA repair and recombination proteins [BR:
svt03400
]
SVTN_22660
Enzymes [BR:
svt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SVTN_22660
Transcription machinery [BR:
svt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SVTN_22660
DNA repair and recombination proteins [BR:
svt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SVTN_22660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
Motif
Other DBs
NCBI-ProteinID:
AJF66755
UniProt:
A0A0B5HXW1
LinkDB
All DBs
Position
5036230..5040129
Genome browser
AA seq
1299 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITYVDDERRTRDLPSLEAHVSVERQQIENRRDSDLEARAKKLEND
LAELEAEGAKADVRRKVREGAEREMKQLRDRAQREIDRLDEVWSRFKNLKVQDLEGDELL
YRELRDRFGTYFDGSMGAAALQKRLESFDLEEEAERLREIIRTGKGQKKTRALKRLKVVS
AFLQTANSPKGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSARSVIVVGPQLKLHQCGLPKAMALELFKPFVMKRLVDLNHAQNIKSAKRMVERGR
TVVYDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPADGRPVTMPTQDMVLGLFFLTTDGELRDTKGE
GRAFGSTAEAIMAFDAGELALQSQIEIRFPVGTVAPRGWVPPVAEEGEPEWQQGDSFRLK
TSLGRALFNELLPEDYPFVDYSVGKKQLSEIVNDLAERYPKVIVAATLDNLKAAGFYWAT
RSGVTVAISDVVVPEAKKEIVKGYEAQDEKVQKQYERGLITKEERTQELIAIWTKATNEV
AEAMNANFPKTNPIFMMVDSGARGNMMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLS
VLEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLKLRIAAKD
EAGVLRKTDDVETSVYARMLAEDVVVDGKVIAPANVDLGDVLIDALVNAGVEEVKTRSVL
TCESAVGTCAFCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDIT
QGLPRVVELFEARQPKGVAPISEAAGRVRIEETEKTKKIVVTPDDGTDETAFPISKRARL
LVGEGDHVEVGQKLTVGATNPHDVLRILGQRAVQVHLVGEVQKVYNSQGVSIHDKHIEII
IRQMLRRVTIIESGDAELLPGELVERSKFETENRRVVTEGGHPASGRPQLMGITKASLAT
ESWLSAASFQETTRVLTDAAINAKSDSLIGLKENVIIGKLIPAGTGLSRYRNIRVEPTEE
AKAAMYSAVGYDDIDYSPFGSGSGQAVPLEDYDYGPYNQ
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctccggatcggtctggccaccgctgacgacatc
cgtcagtggagccacggcgaggtcaagaagccggagaccatcaactaccgcaccctgaag
cccgagaaggacggactcttctgcgagaagatcttcggtccgacccgggactgggagtgc
tactgcggcaagtacaagcgcgtccgcttcaagggcatcatctgtgagcggtgtggcgtc
gaggtcacccgcgccaaggtgcgccgtgagcggatgggccacatcgagctggccgcgccc
gtcacgcacatctggtacttcaagggcgtcccgtcgcgcctcggctacctgctcgacctc
gccccgaaggacctggagaaggtcatctacttcgcggcgtacatgatcacgtacgtcgac
gacgagcgccgtacgcgtgacctgccctccctggaggcgcacgtctccgtcgagcgtcag
cagatcgagaaccgtcgcgactccgacctggaggcccgcgccaagaagctcgagaacgac
ctcgccgagctggaggccgagggcgccaaggccgacgtgcgccgcaaggtgcgcgagggt
gccgagcgcgagatgaagcagctgcgcgaccgtgcgcagcgcgagatcgaccgtctggac
gaggtctggtcccgcttcaagaacctcaaggtccaggacctggagggcgacgagctcctc
taccgcgagctgcgtgaccgcttcggcacgtacttcgacggttcgatgggtgccgcggcg
ctgcagaagcgtctcgagtccttcgacctggaggaggaggccgagcgcctccgcgagatc
atccgtaccggcaagggccagaagaagacccgtgcgctcaagcgcctcaaggtcgtctcc
gcgttcctgcagaccgcgaacagccccaagggcatggttctcgactgcgtcccggtcatc
ccgccggacctgcgtccgatggtgcagctggacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgtgtcatcaaccgcaacaaccgcctgaagcggcttctcgacctc
ggtgcccccgagatcatcgtgaacaacgagaagcgcatgctccaggaggcggtcgacgcc
ctcttcgacaacggccgtcgtggtcgcccggtgacgggccccggcaaccgtccgctgaag
tccctcagcgacatgctgaagggcaagcagggtcgattccgtcagaacctgctcggcaag
cgtgtcgactactcggcgcgttccgtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggtctgccgaaggccatggcgctcgagctcttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagtcggccaagcggatggtcgagcgcggccgc
acggtcgtgtacgacgtcctcgaagaggtcatcgccgagcacccggttctgctgaaccgt
gcgcccacgctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtctgcaccgcgttcaacgcggacttcgacggtgaccag
atggccgtccacctgccgctctccgcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctcaagcccgccgacggccgtccggtgacgatgccgacccaggac
atggtcctcggtctgttcttcctcaccaccgacggcgagctccgtgacaccaagggcgag
ggccgcgcgttcggctccacggccgaggcgatcatggcgttcgacgccggcgagctcgcg
ctgcagtcgcagatcgagatccgcttcccggtcggcaccgtcgctccccgtggctgggtt
cccccggtcgccgaggagggcgagccggagtggcagcagggtgactcgttccgtctgaag
acctcgctgggccgcgcgctcttcaacgagctgctgcccgaggactacccgttcgtcgac
tactccgtcggcaagaagcagctctccgagatcgtcaacgacctcgccgagcgctacccc
aaggtcatcgtggcggcgacgctcgacaacctgaaggcggcgggcttctactgggcgacc
cgttccggcgtcaccgtggccatctccgacgtcgtcgttcccgaggcgaagaaggagatc
gtcaagggctacgaggcgcaggacgagaaggtccagaagcagtacgagcgcggtctgatc
accaaggaagagcgcacgcaggagctcatcgcgatctggaccaaggcgaccaacgaggtc
gccgaggcgatgaacgcgaacttccccaagacgaaccccatcttcatgatggttgactcg
ggtgcccgaggaaacatgatgcagatgcggcagatcgccggtatgcgtggtctggtgtcg
aacgcgaagaacgagaccatcccgcgtccgatcaaggcctcgttccgtgagggcctctcc
gtcctcgagtacttcatctcgacgcacggtgcccgtaagggtctcgccgacaccgccctg
cgtaccgccgactcgggttacctgacccgtcgtctggtggacgtctcgcaggacgtcatc
atccgcgaggaggactgtggcaccgagcgcggtctgaagctgcggatcgcggccaaggac
gaggccggtgtcctgcggaagacggacgacgtcgagacctccgtgtacgcgcggatgctc
gccgaggacgtcgtcgtcgacggcaaggtcatcgcgccggccaacgtcgacctgggtgac
gtgctcatcgacgccctggtcaacgcgggcgtcgaggaggtcaagacccgttcggtcctg
acctgtgagtccgccgtcggtacctgtgcgttctgctacggccgttcgctcgccaccggc
aagctggtcgacatcggtgaggcggtcggcatcatcgccgcccagtccatcggtgagccc
ggtacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgacgacatcacc
cagggtctgccccgtgtcgtcgagctcttcgaggctcggcagccgaagggtgtcgccccg
atctccgaggcggccggtcgcgtccgcatcgaggagaccgagaagaccaagaagatcgtc
gtcactccggacgacggcaccgacgagacggcgttcccgatctcgaagcgtgcccgtctg
ctcgtgggcgagggcgaccacgtcgaggtgggccagaagctcaccgtgggtgccaccaac
ccgcacgacgtgctccggatcctcggtcagcgcgcggtccaggtccacctggtcggcgaa
gtccagaaggtctacaactcgcagggcgtgtcgatccacgacaagcacatcgagatcatc
atccggcagatgctgcgccgcgtgacgatcatcgagtccggcgacgcggagctcctgccg
ggcgagctggtcgagcgttcgaagttcgagaccgagaaccgtcgtgtggtcaccgagggc
ggtcaccccgcctccggccgtccgcagctgatgggtatcaccaaggcctcgctggcgacg
gagtcctggctgtcggccgcctccttccaggagacgacccgagtcctgacggatgcggcg
atcaacgccaagtccgacagcctcatcggcctcaaggagaacgtcatcatcggtaagctc
atcccggccggtacgggtctgtcccgctaccgcaacatccgggtcgagccgaccgaggag
gccaaggccgcgatgtactcggccgtcggctacgacgacatcgactactcgccgttcggc
tcgggctccggccaggccgttccgctggaggactacgactacggtccgtacaaccagtaa
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integrated database retrieval system
