Streptomyces vietnamensis: SVTN_23120
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Entry
SVTN_23120 CDS
T03586
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
svt
Streptomyces vietnamensis
Pathway
svt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
svt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SVTN_23120 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svt03019
]
SVTN_23120 (groEL)
03110 Chaperones and folding catalysts [BR:
svt03110
]
SVTN_23120 (groEL)
03029 Mitochondrial biogenesis [BR:
svt03029
]
SVTN_23120 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svt04147
]
SVTN_23120 (groEL)
Enzymes [BR:
svt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SVTN_23120 (groEL)
Messenger RNA biogenesis [BR:
svt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SVTN_23120 (groEL)
Chaperones and folding catalysts [BR:
svt03110
]
Heat shock proteins
HSP60 / Chaperonin
SVTN_23120 (groEL)
Mitochondrial biogenesis [BR:
svt03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SVTN_23120 (groEL)
Exosome [BR:
svt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SVTN_23120 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
SVTN_23120 (groEL)
Exosomal proteins of breast cancer cells
SVTN_23120 (groEL)
Exosomal proteins of colorectal cancer cells
SVTN_23120 (groEL)
Exosomal proteins of bladder cancer cells
SVTN_23120 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AJF66841
UniProt:
A0A0B5I2N6
LinkDB
All DBs
Position
5111503..5113131
Genome browser
AA seq
542 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
IEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLRNVAAGASPAALKKGID
AAVKAVSDELLATARPIEDKSDIAAVAALSAQDQQVGELIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYMVTDQERMEAVLDDPYILIHQGKISSIQDLLPILEKVIQ
AGASKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLGDMATLTGATV
IAEEVGLKLDQAGLDVLGTARRVTITKDDTTIVDGGGNSEDVAGRVNQIKAEIESTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HAVKVLEGNLDKTGDEATGVAVVRRAAVEPLRWIAENAGLEGYVITSKVAELEKGNGFNA
ATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKKEEEPADHGHGHGHGH
SH
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgcccttgagcgcggcgtcaac
aagcttgccgacacggtgaaggtgacgatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggcgcccccaccatcaccaacgacggtgtcacgatcgcccgcgaggtcgag
atcgaggacccgtacgagaacctcggcgcccagctcgtgaaggaggtggcgaccaagacc
aacgacatcgcgggtgacggcaccaccaccgccaccgtgctcgcccaggccctggtccga
gagggtctgcgcaacgtcgccgccggcgcctccccggccgccctcaagaagggcatcgac
gccgccgtcaaggccgtctccgacgagctgctcgccaccgcgcgcccgatcgaggacaag
tccgacatcgccgccgtcgccgcgctctccgcgcaggaccagcaggtcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggcctggagctcgacttcaccgagggcatggccttcgacaagggctacctgtccccg
tacatggtgaccgaccaggagcgcatggaggccgtcctcgacgacccgtacatcctgatc
caccagggcaagatctcctcgatccaggacctgctgcccatcctggagaaggtcatccag
gccggcgccagcaagccgctcctgatcatcgccgaggacgtcgagggcgaggccctctcc
accctcgtcgtcaacaagatccgtggcaccttcaacgccgtcgccgtcaaggcccccggc
ttcggtgaccgccgcaaggcgatgctcggcgacatggccaccctcaccggtgccaccgtc
atcgccgaggaggtcggcctcaagctcgaccaggccggtctcgacgtgctgggcaccgcc
cgccgcgtgaccatcaccaaggacgacaccaccatcgtcgacggtggcggcaactccgag
gacgtcgcgggccgcgtcaaccagatcaaggccgagatcgagtccacggactccgactgg
gaccgcgagaagctccaggagcgcctcgcgaagctcgccggcggcgtgtgcgtcatcaag
gtcggcgccgccaccgaggtggagctgaaggagaagaagcaccgtctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgcgctcgtc
cacgccgtcaaggtcctcgagggcaacctcgacaagaccggcgacgaggccaccggtgtc
gcggtcgtccgccgcgccgccgtcgagccgctgcgctggatcgccgagaacgccggcctc
gagggctacgtcatcacctcgaaggtggcggagctggagaagggcaacggcttcaacgcc
gcgaccggcgagtacggcgacctggtcaaggccggcgtcatcgacccggtgaaggtgacg
cgctccgccctggagaacgccgcctcgatcgcctccctcctcctcaccaccgagaccctc
gtggtggagaagaaggaagaggagccggcggaccacggtcacggccacggtcacggccac
tcccactga
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