KEGG   Streptomyces vietnamensis: SVTN_27695
Entry
SVTN_27695        CDS       T03586                                 
Name
(GenBank) ribonuclease
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
svt  Streptomyces vietnamensis
Pathway
svt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:svt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SVTN_27695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:svt03019]
    SVTN_27695
Messenger RNA biogenesis [BR:svt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SVTN_27695
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: AJF67608
UniProt: A0A0B5ID58
LinkDB
Position
6144584..6146269
AA seq 561 aa
MSHPHPELGAPPKLPKGGLRVIPLGGLGEIGRNMTVFEFDGRLLIVDCGVLFPEEEQPGI
DLILPDFTIIRDRLDDIEGIVLTHGHEDHIGAVPYLLRLKPDIPLIGSKLTLALIEAKLQ
EHRIRPYTLEVKEGDREQLGPFDCEFVAVNHSIPDALAVAIRTPAGMAVATGDFKMDQLP
MDGRLTDLHAFARLSEEGIDLLLSDSTNAEVPGFVPPERDISNVLRNVFANAPKRIIVAS
FASHVHRIQQIIDAAHEYGRRVAFVGRSMVRNMGIARDLGYLRVPAGLVVDVKTLDDLPD
DEVVLVCTGSQGEPMAALSRMANRDHQIRIVPGDTVILASSLIPGNENAVYRVINGLTRW
GANVVHKGNAKVHVSGHASAGELLYFYNICKPKNLMPVHGEWRHLRANAELGAMTGIPKD
HIVIAEDGVVVDLVDGRARITGKVQAGYVYVDGLSVGDVTETSLKDRRILGEEGIISVFL
VVDSSTGKIVGGPNIHARGSGIEDAAFDAVIPKIDQALNKSAQDGVVEPHQLQQLIRRTV
GKWVSDTYRRRPMILPVVVEV
NT seq 1686 nt   +upstreamnt  +downstreamnt
ttgagtcatccgcatcctgaactcggcgccccgccgaagctgcccaagggcggcctgcgc
gtcatcccgctcggtggcctcggtgagatcggccgcaacatgacggtcttcgagttcgac
ggccgtctgctgatcgtcgactgcggcgtcctcttccctgaagaggagcagcccggcatc
gacctgatcctgccggacttcaccatcatccgggaccgcctcgacgacatcgagggcatc
gtgctcacgcacggccacgaggaccacatcggtgccgtcccgtacctgctccggctgaag
ccggacatcccgctcatcggctccaagctgaccctcgccctcatcgaggcgaagctccag
gagcaccgcatccgcccctacaccctcgaggtgaaggaaggcgaccgcgagcagctgggc
cccttcgactgcgagttcgtcgcggtcaaccactccatcccggacgccctggccgtcgcc
atccgcacccccgcgggcatggccgtcgccaccggtgacttcaagatggaccagctcccg
atggacggccggctcaccgacctccacgcgttcgcgcggctcagcgaggagggcatcgac
ctcctgctgtccgactcgacgaacgccgaggtcccgggcttcgtcccgccggagcgcgac
atctcgaacgtcctgcggaacgtcttcgcgaacgccccgaagcgcatcatcgtggccagc
ttcgccagccacgtgcaccgcatccagcagatcatcgacgccgcccacgagtacggccgc
cgggtcgccttcgtcggccgctcgatggtccgcaacatgggcatcgcccgcgacctgggc
tacctccgggtcccggccggcctcgtcgtggacgtgaagaccctcgacgacctgccggac
gacgaggtcgtgctggtctgcacgggttcccagggcgagcccatggcggccctgtcccgc
atggccaaccgcgaccaccagatccgcatcgtccccggcgacacggtgatcctcgcgtcc
tccctcatcccgggcaacgagaacgcggtctaccgcgtgatcaacggcctgacccgctgg
ggcgcgaacgtggtccacaagggcaacgccaaggtccacgtctcgggccacgcctcggcc
ggcgagctgctgtacttctacaacatctgcaagccgaagaacctcatgccggtccacggc
gaatggcgccacctgcgcgccaacgccgagctcggcgcgatgacgggcatccccaaggac
cacatcgtcatcgccgaggacggcgtcgtcgtcgacctggtcgacggccgcgcccgcatc
accggcaaggtccaggcgggctacgtgtacgtggacggcctctcggtcggcgacgtcacg
gagacctccctcaaggaccgccgcatcctgggcgaggaaggcatcatctcggtcttcctg
gtggtcgactcctccaccggcaagatcgtgggcggcccgaacatccacgcccgcggctcc
ggcatcgaggacgccgccttcgacgcggtgatcccgaagatcgaccaggccctcaacaag
tcggcccaggacggcgtcgtcgaaccccaccagctccagcagctgatccgccgcaccgtc
ggcaagtgggtctccgacacctaccgccggcgcccgatgatcctcccggtcgtcgtcgag
gtctga

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