KEGG   Streptomyces vietnamensis: SVTN_28150
Entry
SVTN_28150        CDS       T03586                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
svt  Streptomyces vietnamensis
Pathway
svt02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:svt00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    SVTN_28150
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:svt03021]
    SVTN_28150
Transcription machinery [BR:svt03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SVTN_28150
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HC2 Sigma70_r1_1
Other DBs
NCBI-ProteinID: AJF67689
UniProt: A0A0B5IH92
LinkDB
Position
6262315..6263868
AA seq 517 aa
MFVSASTSRTLPPEIAESESVMALIERGKADGQIAGDDVRRAFEADQIPPTQWKNVLRSL
NQILEEEGVTLMVSAAESPKRARKSVAAKSPAKRTATKTVTARTTVTKTTVSASTAAAAE
GTDPADEAGSPAKKAAAKKTVAKKAVAKKTVAKKTAAKKTTSKKDADELIEGEELLEDVA
PGKGEDEETEGESKGFVLSDEDEDDAPAQQVAVAGATADPVKDYLKQIGKVPLLNAEQEV
ELAKRIEAGLFAEDKLANSDKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYT
GRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVH
MVEVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDG
DSEFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDE
IGKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq 1554 nt   +upstreamnt  +downstreamnt
ttgttcgtgtcggccagcacatcccgtacgctcccgccggagatcgccgagtccgagtct
gtgatggcgctcatcgagcggggaaaggctgatgggcagatcgccggcgatgacgtgcgt
cgggccttcgaagctgaccagattccgccaacccagtggaagaatgttctgcgcagcctc
aatcagatcctcgaggaagagggtgtgacgctgatggtcagtgcagcggagtcgccgaag
cgcgcccgcaagagcgtcgcagcgaagagcccggccaagcgcaccgccaccaagaccgtc
accgccaggacgaccgtgacgaagaccaccgtctcggcctccacggccgccgcggccgag
ggcaccgacccggccgacgaggccggatcgcccgccaagaaggcggccgcgaagaagacc
gtcgccaagaaggcggtggccaaaaagaccgtcgccaagaagacggccgccaagaagacc
acgtccaagaaggacgccgacgagctcatcgagggcgaggagctcctcgaggacgtcgcg
cccggcaagggtgaggacgaggagaccgagggcgagagcaagggcttcgtcctgtccgac
gaggacgaggacgacgcgccggcccagcaggtcgccgtcgccggtgccaccgccgacccg
gtcaaggactacctcaagcagatcggcaaggtcccgctgctcaacgccgagcaggaggtc
gagctcgccaagcgcatcgaggccggtctgttcgccgaggacaagctcgcgaactcggac
aagctcgctccgaagctcaagcgcgagctggagatcatcgccgaggacggccgccgggcc
aagaaccacctcctggaggccaacctccgtctggtggtctcgctggccaagcgctacacc
ggccgcggcatgctcttcctggacctgatccaggagggcaacctgggtctgatccgcgcc
gtcgagaagttcgactacaccaagggctacaagttctccacgtacgccacctggtggatc
cgtcaggcgatcacccgcgccatggccgaccaggcccgcaccatccgtatcccggtgcac
atggtcgaggtcatcaacaagctcgcgcgcgtgcagcgccagatgctccaggacctgggc
cgtgagcccaccccggaggagctggccaaggagctcgacatgacccccgagaaggtcatc
gaggtccagaagtacggccgtgagccgatctccctccacaccccgctgggtgaggacggc
gacagcgagttcggcgacctcatcgaggactccgaggcggtcgtgccggccgacgcggtc
agcttcacgctgctccaggagcagctgcactccgttctcgacacgctctccgagcgcgag
gcgggcgtcgtctccatgcgcttcggcctcaccgacggccagccgaagacgctggacgag
atcggcaaggtctacggcgtgacgcgagagcggatccgtcagatcgagtcgaagacgatg
tcgaagctccgtcacccgtcgcgctcgcaggtcctgcgcgactacctcgactga

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