Streptomyces vietnamensis: SVTN_32620
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Entry
SVTN_32620 CDS
T03586
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
svt
Streptomyces vietnamensis
Brite
KEGG Orthology (KO) [BR:
svt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svt03021
]
SVTN_32620
Transcription machinery [BR:
svt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SVTN_32620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
Sigma70_ECF
HTH_24
RPEL
HTH_37
KORA
MarR
Motif
Other DBs
NCBI-ProteinID:
AJF68387
UniProt:
A0A0B5ID10
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All DBs
Position
complement(7288094..7289014)
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AA seq
306 aa
AA seq
DB search
MSTAGERSDTTLTTAAVPGPGPDTTGATTRRAALDGIPEPACPTAVSTDDARTLSVALFA
RLRALEEGTPEYAYVRNTLIELNLSLVKFAARRFRNRAEPTEDIIQVGTIGLIKAIDRFD
PDRTVDFSAFALPTIVGEMKRFFRDTSWAVRVPRRLQELRIDLAKAADVLEQRLGRRPTR
AELAAELHLTEEEVSEGQLAAHGYAARSLDVPAGDEESTPGAGARHLSSSEPSYELIESL
TALRPLLARLDDRDRRILELRFGEELTQAEIGHRIGLSQMHVSRLLTRILGELKDDLLGE
GTAAGD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgccggagaacgctccgacaccacgctcaccaccgccgccgtccccggcccg
gggcccgacaccacgggcgccacgacccggcgggcggcactggacggtatccccgagccg
gcctgcccgaccgccgtctccacggacgacgcccgaaccctgtccgtcgcactgttcgca
cgactccgggccctggaggaggggacccccgagtacgcgtacgtccgcaacacgctgatc
gaactcaacctcagcctcgtcaagttcgccgcccggaggttccggaaccgcgccgagccc
accgaggacatcatccaggtcggcacgatcggcctgatcaaggccatcgaccgcttcgac
cccgaccgcaccgtcgacttctccgccttcgccctccccaccatcgtgggcgagatgaag
cggttcttccgggacaccagctgggcggtacgggttccccgccggctccaggagctgcgg
atcgacctcgcgaaggcggccgacgtcctggaacagcgcctcggccgccgccccacccgg
gcggaactggccgcggagctgcacctcacggaggaggaggtctccgagggccagctcgcg
gcccacggttacgcggcccggtccctggacgtccccgccggtgacgaggagtccaccccc
ggcgcgggcgcccgtcacctgtccagctcggagccctcgtacgagctgatcgagtcgctg
acggcgctgcggccgctgctcgcccggctcgacgaccgcgaccggcgcatcctggagctc
cgcttcggcgaagagctcacccaggcggagataggccaccggatcggcctctcccagatg
cacgtctcgcgcctcctcacccgcatcctcggcgaactcaaggacgacctcctcggggag
ggcaccgcggcgggcgactga
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