Streptomyces vietnamensis: SVTN_33060
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Entry
SVTN_33060 CDS
T03586
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
svt
Streptomyces vietnamensis
Brite
KEGG Orthology (KO) [BR:
svt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svt03021
]
SVTN_33060
Transcription machinery [BR:
svt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SVTN_33060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
HTH_23
HTH_Crp_2
HTH_37
Sigma70_ECF
MarR
HTH_31
MarR_2
HTH_Tnp_4
DUF1492
Topo-V_HhH_2_2nd
HTH_3
PilO
Motif
Other DBs
NCBI-ProteinID:
AJF70127
UniProt:
A0A0B5IHY1
LinkDB
All DBs
Position
complement(7380025..7380867)
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AA seq
280 aa
AA seq
DB search
MSMAGVESGTRALPEIADTSAVAPRDARALSKVFFQELATLEEGTPAYQYARNTLIEMNM
SLVRYAAGRFRHRADEMEDIVQVGMIGLIKAIDRFELSREVEFTTFAVPYIVGEIKRFFR
DTSWAVHVPRRLQEARVELAKATEELSTRLGRMPTVKELAELMSLSEEEVTEARLASNGY
NSSSLDAALNGEDEDNDASLADFIGTEDPAMELVEDFHSLAPLIADLDERDRRIIHMRFV
EELTQAQIGERLGCSQMHVSRLLSRTVKRLREGLLGTGAG
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggcgggagtcgagtccggaacacgggcgctgccggagatcgcggacacgtcg
gcggtcgcacccagggacgcgagggccctgtcgaaggtcttcttccaggagctcgcgacg
ctggaggaggggacgcccgcgtaccagtacgcgcggaacaccctcatcgagatgaacatg
agcctggtccgctacgccgccgggcgcttccggcaccgcgccgacgagatggaggacatc
gtccaggtcggcatgatcggcctgatcaaggcgatcgaccggttcgagctgtcgcgcgag
gtcgagttcaccaccttcgcggtcccctacatcgtcggcgagatcaagcggttcttccgg
gacacctcctgggcggtgcacgttccccgcaggctccaggaggcgcgcgtggagctggcc
aaggcgaccgaggaactcagcacccgcctgggacggatgccgacggtcaaggaactggcc
gagctgatgagcctcagcgaggaggaggtcaccgaggcgcggctggcttccaacggctac
aactcctcgtcgctcgacgccgccctcaacggcgaggacgaggacaacgacgcctcgctg
gccgacttcatcggcactgaggaccccgccatggagctggtggaggacttccactcgctg
gctccgctcatcgccgacctcgacgagcgcgaccgccggatcatccacatgcggttcgtc
gaggaactgacccaggctcagatcggtgagcggctgggctgctcgcagatgcacgtctcg
cggctcctctcgcgcaccgtgaagcgcctgcgcgagggtctgctgggcaccggcgccggc
tga
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