Streptomyces violaceoruber: B1H20_01405
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Entry
B1H20_01405 CDS
T05124
Name
(GenBank) B/F/G family RNA polymerase sigma-70 factor
KO
K03090
RNA polymerase sigma-B factor
Organism
svu
Streptomyces violaceoruber
Brite
KEGG Orthology (KO) [BR:
svu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svu03021
]
B1H20_01405
Transcription machinery [BR:
svu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B1H20_01405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
MarR_2
HTH_10
DUF7343
HTH_23
MarR
HTH_3
HTH_37
PF0610-like_N
HTH_24
KORA
Ub-Mut7C
GerE
Motif
Other DBs
NCBI-ProteinID:
ARF60189
UniProt:
A0A1V0U4R0
LinkDB
All DBs
Position
315577..316467
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AA seq
296 aa
AA seq
DB search
MTVQTSQTAQSVQTAGTDVTGTAEDLPWIEDAGKVAPMDARRLSRLFFDRLQVLEEGTHE
YQYARNTLIEMNLSLVRFAANRFRNRGSGDMEDIVQVGTIGLIKAIDRFDLSREVEFTSF
AVPYIVGEIKRFFRDTSWAVHVPRRLQELRVDLAKAKEALAADLDRDPTVKELAEALGIE
ESEVTEGIVASNGYTAGSLDMPTDTAESGPGQSGARTFADVLGGLDPAMESVENLHALAP
LLSELDERERRIIDMRFGQEMTQAQIGAELGISQMHVSRLLSRMLGRLRDGMLVQE
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgcagacctcgcagaccgcacagtccgtgcagacggcgggtacggacgtgacg
ggcaccgccgaggatcttccctggatcgaggatgccgggaaggtcgccccgatggacgcg
cgccgcctctcgcgtctcttcttcgatcggctccaggtcctggaggaggggacgcacgag
taccagtacgcgcgcaacaccctcatcgagatgaacctgtccctggtccggttcgccgcc
aaccgcttccgcaaccggggcagcggtgacatggaggacatcgtccaggtcggcaccatc
gggctgatcaaggcgatcgaccgcttcgacctctcgcgggaggtcgagttcacgtcgttc
gccgtgccgtacatcgtcggggagatcaagcgcttcttccgtgacacgagctgggcggtg
cacgtgccgcgccgcctccaggagctgcgggtcgacctcgccaaggcgaaggaggcgctg
gccgccgacctcgaccgggaccccacggtcaaggagctggcggaagccctgggcatcgag
gagtccgaggtcaccgagggcatcgtcgcctccaacggctacacggcgggctccctggac
atgccgaccgacacggcggagagcgggcccggtcagagcggcgcgcggaccttcgccgat
gtgctgggcggcctcgaccccgcgatggagagcgtggagaacctgcacgccctcgctccc
ctgctgagtgagctcgacgagcgggagcgccggatcatcgacatgcgcttcggccaggag
atgacccaggcccagatcggcgccgagctgggcatctcgcagatgcacgtgtcccggctg
ctgagccggatgctcggccggctgcgcgacgggatgctcgtccaggagtga
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