Streptomyces violaceoruber: B1H20_02490
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Entry
B1H20_02490 CDS
T05124
Name
(GenBank) B/F/G family RNA polymerase sigma-70 factor
KO
K03090
RNA polymerase sigma-B factor
Organism
svu
Streptomyces violaceoruber
Brite
KEGG Orthology (KO) [BR:
svu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svu03021
]
B1H20_02490
Transcription machinery [BR:
svu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B1H20_02490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
HTH_Crp_2
DUF134
DUF7343
MarR
HTH_24
YdaS_toxin
HTH_31
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
ARF60380
UniProt:
A0A1V0U5L8
LinkDB
All DBs
Position
569585..570379
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AA seq
264 aa
AA seq
DB search
MQDSLAPQPDPGPVDRARTAAFRRLRALPPGPERDALRDETICGWLPMAHRLATRFRDRG
ENMDDLRQVAAMGLVKAVDRYDPERGKAFETYAVPTVTGELKRHFRDHTWDVHVPRRVQD
LRNRVRVARRELAQTSSGRAPTCAEISSATGLAEEDVVLGLEALDSYSALSLDAEPAGSE
GGMPLVDRLGSCDSALDVAVDRESVKPGLRELPERERTILYLRYFQDMTQVRIAEHLGIS
QMHVSRLLSQSCARVRDGVLQGAV
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcaggattcccttgccccccagccggaccccggccccgtcgaccgggcgcgcaccgcc
gcgttccgcaggctgcgggcgctgccgccggggccggagcgggacgcgctgcgggacgag
acgatctgcggctggctgccgatggcccaccgactggcgacccgcttccgcgaccggggc
gagaacatggacgatctgcggcaggtggccgcgatggggctggtcaaggcggtggaccgg
tacgaccccgagcgcggcaaggcgttcgagacgtacgccgtgcccaccgtcaccggggag
ctgaagcggcacttccgcgaccacacctgggacgtccacgtcccgcgccgggtgcaggac
ctgcgcaaccgggtcagggtggcccgccgcgagctcgcccagacctcctcgggcagagcc
ccgacctgcgccgagatctcctccgccaccggactggccgaggaggacgtggtgctcggc
ctggaggccctggacagctacagcgccctctccctggacgcggagccggccggctccgag
ggcggtatgcccctggtcgaccggctgggctcctgcgacagcgcgctggacgtcgccgtg
gaccgcgagtccgtcaagccggggctgcgcgaactgccggagcgggagcgcaccatcctg
tacctccgctatttccaggacatgacccaggtccgcatcgccgaacacctcggcatctcg
cagatgcacgtctcgcgcctgctcagccagtcctgcgcacgcgtacgcgacggagtgctc
cagggagccgtctga
DBGET
integrated database retrieval system
