Streptomyces violaceoruber: B1H20_07470
Help
Entry
B1H20_07470 CDS
T05124
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
svu
Streptomyces violaceoruber
Pathway
svu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
svu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B1H20_07470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svu03400
]
B1H20_07470
Enzymes [BR:
svu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
B1H20_07470
DNA repair and recombination proteins [BR:
svu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
B1H20_07470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ARF61261
UniProt:
A0A1V0U818
LinkDB
All DBs
Position
1684721..1685587
Genome browser
AA seq
288 aa
AA seq
DB search
MHALRNPVGGHVPVAGGLAKVGLEYARELAAETVQVFVANPRGWATPAGNPAQDELFRAG
CAAASIPAYVHAPYLINFGSHTEATVEKSVDSLRHSLRRAREIGALGVVVHTGSATGGRP
RAEALAQVREHMRPLLDELTHDDDPDLLLESTAGQGSSLCSRTWDFGPYFEALDSHPKLG
ICLDTCHIYAAGHDLTGPSGMRQTLDLLVETVGAGRLKLIHANDSKDVVGAHKDRHENIG
SGHIGAEPFGELFAHPATEGVPLIIETPGGKEGHAADVARLKELRAAR
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcacgctctgcgcaatccggtgggcggccacgtcccggtggccggcggtctcgccaag
gtcggcctggagtacgcccgggagctggcggcggaaaccgtccaggtcttcgtggccaac
ccgcgcggctgggcgacgcctgccgggaacccggcgcaggacgagctgttccgcgccggg
tgcgcggcggcctcgatcccggcgtacgtgcacgccccgtatttgatcaacttcggctcg
cacaccgaggcgacggtggagaagtcggtggactctctgcgccactcgctgcggcgggcg
cgggagatcggcgcgctgggcgtggtggtgcacaccgggtccgcgaccggcggccggccg
cgggcggaggcgctggcacaggtgcgcgagcacatgcggccgctgctggacgagctgacc
catgacgacgacccggatctgctgctggagtcgacggcgggccagggctcctcgctctgt
tcgcggacctgggacttcgggccgtacttcgaggcgctggactcccacccgaagctgggg
atctgtctggacacctgccacatctacgccgccggccacgacctgaccggcccgtccggc
atgcggcagaccctggacctgctggtggagacggtcggcgcgggacggctcaagctgatc
cacgccaacgactccaaggacgtcgtgggcgcccacaaggaccggcacgagaacatcggc
tccggtcacatcggggcggagccgttcggcgagctgttcgcgcatccggcgaccgagggc
gtaccgctgatcatcgagacgcccggcggcaaggaggggcacgcggcggacgtggcccgg
ctgaaggagctgcgggcggcccgttag
DBGET
integrated database retrieval system