Streptomyces violaceoruber: B1H20_08950
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Entry
B1H20_08950 CDS
T05124
Name
(GenBank) sugar-binding protein
Organism
svu
Streptomyces violaceoruber
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6443
DUF6531
Motif
Other DBs
NCBI-ProteinID:
ARF61519
UniProt:
A0A1V0U8J9
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All DBs
Position
complement(2058654..2064959)
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AA seq
2101 aa
AA seq
DB search
MVLQRRRRLLPKIALGAAMVLAVELALVTQGGHAVALTQQAAKAPVEEKQAPEGPREAAD
ILSAKVAAKLSGKRVEALSERTETSTTWVNKDGSLTTELSSGPVRFEQDGSWTDVDVELR
ETAEGVEAKAHPNGLSLAGRGGRLPRSLAEAERAPARDLVTLGEGDERITLQWQGGLPAP
ELDGTRATYPEALPGADVIVEATRTGFEQYVEIKKRPAEGYTYTLPLKAEGLTAKEQPDG
SVLFTDGKNKKRAVMPAPVMWDSTVDEVSGEHTRRVPVAMKVVEREDAVDLVVTPDAKFL
ADPETTYPVTVDPSTSSLSNVFDTYVQQGETRDWSTDVELDFGNPGTTNANGTPRTAQSF
ITWNTAPIADALVTSAKLSLWNFHSANTTCAAQPWQVWSSPAATTASRWTNRPTMTAMKA
ESTETRGNAACTAQPDGWINANVTTLAQEWASAKTTRGHLGIRAKSETTVAQWKRVNSAN
AAKNPPKLSVTYNYRPRTGTKQEAGPPFFSYGGAYMVNTVRPTLRDTFVDPNGDKIQGAY
QIFDNATDTQVGDVLRSGFVPSGQPAPVTVPAGVLANGKTYKFRSSPYDGTHYNLGWSPW
KTFTVDTTAPSAPAKIVSTDYPADKWVKGAGQAGTFTVTPPSGSDHNWLEWSLDGLTWTK
VGTGGTATARAISVAPPKDGTHTLQVRAVDKADNKSEAIDYTFHAGPGGFIQPSDGERTA
RRLPLVAEAEAAKYNAVAFSWRRSEADPWVRIPAGQVTSNGTPLTAWPVPMTGGRNAPLV
WNATDTVDPDGTVQLKADLTGPNNATGATEPLTVIVDRNASGAATSEAGPGSVNLLTGDY
SLSATDSSGFDLSVSRTASSRIPDKGAQQEGQVAIFGKEWVSGTAAELTESDYVQLHRVS
DTAVTVVDAEGEELFFTANAAKNGWIPEPGAEDLTLTGSVTGSFTLSDTEGTVTEFTKPD
PGVPTWQVSSTLLDGLANTATTIVSETVTVDGKKLARPKRIIAPTSAATTAACTATPATK
GCRVLEFVYATGTTATASAFGDFAGRVKEIRQWSTQPGAAAATSKAVQSYAYDNSGRLRQ
TWDPQITPSLKTEYAYDSAGRVTGLTPAGELPWTFTYGKAGNAATAGEGMLLKASRSGLQ
QGTTGTESGTAATSVVYDVPLTGTTAPYKMGAADVKAWGQLDAPTDATAVFPADSVPASA
TGSALTSASYKRADLTYMGVSGRTVNTVSPGGHTATTEYDRFGNTVRELSAANLAVARGI
TAADRAVQADLGIDRLTVAERADLLATKSVYDEKGTRELEEFGPLRRIDLTADLKSGTTT
LVPSGTPVTARTWTVNEFDAGRPTDGTAKVRDQITKTTTGAQVREHPTVLGEARITQTVY
DWAKGLPTKTVKAPGGLAITETTEYDAQGRVTKQLLPGATGSDAATRVTTYWSATGTGTC
QGRPEWADLVCSTGPAGAITGGGSNPAALPTTTTEYDGWGNPAKATETANGVTRTTTTTY
DNSGRQTKVAITGGTGQAVPETTTEYDPATGRAVKTVSPTGGTVTKVFDKLGRQVSYTDA
DGGVTTTEYDLLDRPVKVTDNAPSTVTHTYDHTAEPRGLATKTTDSVAGTFQATYDADGS
VSSEKLPGGYTLTQTEDTTGSATDRTYTRDSDGTIVYSDTVTESIHGQVASHAGWSDQTY
RYDAIGRLTTVEDTADTVCTRRAYTFDARTNRKSLTTATGTPGSDCPTTGGTTTNHTYDS
ADRLVDSGHVYDAFGRTTTVPGNGTIGYYANDLAHQQTANGKRQTWQLDANLRFRSWKTE
TGSGSTWTQTASKTNHYDSDGDNPRWITEDTASGALTRNVDSASGDLAATTSKTGDTVLQ
LTTIHGDVALQLPLTAGQAPVALDSDEYGNPRAGQEATRYAWLGAKQRSTETLTGLTLMG
VRLYNPATGRFLSMDPVHGGNANAYEYCTADPINCYDLDGRFGWKKWLGRASTGLAVAGM
FGCAVCAGASAAISLGIAAHDWRKGKRREAVIGGLTAFTWGAGRLASLRHARSVKAIPKR
YPKGVRNSGTKNKRYRSKAKKKANGYGRTARRVNRVDFYYGGAVAGRSIYGEYSSWRSRR
R
NT seq
6306 nt
NT seq
+upstream
nt +downstream
nt
ttggtcctgcagcggcgaagacgtcttctgccgaagatcgccctcggcgcggccatggtg
ctcgcggtggagttggcgctggtcacgcagggcggccatgctgtggccctcacccagcag
gcggcgaaggcgccggtcgaggagaagcaggcgcccgaggggccccgcgaggcggcggac
atcctgtcggcgaaggtcgcggccaagctgtcgggcaagcgggtcgaggcgctgtccgag
cgtaccgagacgtccacgacctgggtcaacaaggacggttcgctcaccacggagctgtcg
tcgggaccggtccgtttcgagcaggacggttcctggaccgatgtcgacgtcgaactgcgg
gagaccgccgaaggcgtcgaggccaaggcccacccgaacggactgagcctcgcgggccgg
ggcggcaggctgccgcgctcgctggccgaggcggagcgggcccccgcccgcgacctggtg
accctcggcgagggcgacgagcgcatcaccctccagtggcagggcggactgcccgccccc
gaactggacggcacccgcgccacctaccccgaggccctgcccggcgcggacgtgatcgtc
gaggcgacccgtaccggcttcgagcagtacgtcgagatcaagaagcggcccgccgagggc
tacacctacaccctgccgctgaaggccgagggcctgacggcgaaggaacagcccgacggc
agcgtcctgttcaccgacggcaagaacaagaagcgggccgtgatgcccgcaccggtgatg
tgggactccaccgtcgacgaggtctccggcgagcacacccgccgggtgccggtggcgatg
aaggtggtggaacgcgaggacgccgtcgacctggtcgtcaccccggacgcgaagttcctc
gccgacccggagacgacgtacccggtcacggtcgacccctcgacctcctccctgtccaac
gtcttcgacacctacgtccagcagggcgagacccgcgactggtccaccgacgtcgaactc
gacttcggcaaccccggcaccacgaacgcgaacggcaccccccgcacggcgcagtccttc
atcacctggaacaccgcgccgatcgctgacgccctggtcaccagcgccaagctgagcctg
tggaacttccactccgccaacaccacctgcgccgcccagccgtggcaggtctggtcctcg
cccgccgcgacgacggccagccggtggaccaaccggccgacgatgaccgccatgaaggcc
gagtccaccgagacccgcggcaacgccgcctgcaccgcgcagccggacggctggatcaac
gcgaatgtgaccacgctcgcccaggaatgggcctccgccaagaccacccgcggccacctg
ggcatccgcgccaagagcgagaccaccgtcgcccagtggaagcgcgtcaactccgccaac
gccgcgaagaacccgccgaagctgtcggtcacgtacaactaccggccgcgcaccggcacc
aagcaggaggccggcccgccgttcttctcctacggcggcgcctacatggtcaacaccgtg
cgccccaccctgcgcgacaccttcgtcgaccccaacggcgacaagatccagggcgcctac
cagatcttcgacaacgccaccgacacccaggtcggcgacgtcctgcgctccggattcgtc
ccctccgggcagcccgctccggtgaccgtcccggccggggtgctggccaacggcaagacg
tacaagttccgcagcagcccctacgacggcacgcactacaacctgggctggtcgccgtgg
aagaccttcaccgtcgacaccaccgccccctccgcgcccgcgaagatcgtctcgaccgac
tacccggcggacaagtgggtcaagggcgcgggccaggccggcacgttcaccgtcaccccg
ccctccggcagtgaccacaactggctggaatggtcgctggacggcctgacctggaccaag
gtcggcaccgggggaaccgccaccgcgagagcgatcagcgtcgccccgcccaaggacggc
acccacaccctccaggtccgggccgtcgacaaggccgacaacaagtccgaggccatcgac
tacaccttccacgccggacccggcgggttcatccagccctccgacggcgaacgcaccgca
cgccggctgccgctggtggccgaggcggaggccgccaagtacaacgcggtcgccttctcc
tggcgccgctccgaagccgacccctgggtccgcatcccggccggacaggtcacctccaac
ggcaccccgctgaccgcgtggcccgtcccgatgaccggcggcaggaacgcccccctggtc
tggaacgccaccgacaccgtcgaccccgacggcaccgtccagctcaaggccgacctcacc
ggccccaacaacgccaccggagccacggaaccgctcaccgtcatcgtcgaccgcaacgcc
tccggcgccgccaccagcgaggcgggacccggttcggtcaatctgctcaccggcgactac
tccctctccgccaccgactcctccggcttcgacctgtcggtctcgcgcacggcctcctcg
cggatccccgacaagggagcgcagcaggagggccaggtcgcgatcttcggcaaggagtgg
gtctcgggcaccgccgccgagctgaccgaatcggactacgtccagctccacagggtctcg
gacacggcggtcacggtcgtcgacgccgagggcgaggagctgttcttcaccgcgaacgcg
gcgaagaacgggtggattccggagccgggagccgaggacctgaccctcaccggcagcgtg
accggttccttcaccctgtccgacaccgagggaaccgtcaccgagttcaccaagcccgac
ccgggcgtgcccacctggcaggtctccagcaccctgctggacggactggccaacaccgcc
accaccatcgtctccgagacggtcaccgtggacggcaagaagctcgcccggcccaagcgg
atcatcgcccccacctccgccgcgaccacggccgcgtgcacggccaccccggccaccaag
ggctgccgcgtgctggagttcgtctacgccaccggcaccacggccaccgcctccgccttc
ggcgacttcgccggccgggtgaaggagatccgccagtggtccacccagcccggcgccgcc
gcggcgacctccaaggccgtgcagtcgtacgcgtacgacaactccggccgcctgcgccag
acgtgggacccgcagatcaccccgtcgctgaagacggagtacgcctatgacagcgcgggc
cgggtcaccggcctgaccccggcgggcgagctgccctggaccttcacctacggcaaggcg
ggcaacgccgccaccgccggtgagggcatgctcctgaaggcgtcccgctcggggctccag
cagggcacgacgggcacggaatccggtacggccgccaccagcgtggtctacgacgtaccg
ctgaccggcaccaccgccccgtacaagatgggcgccgccgacgtgaaggcatgggggcag
ctcgacgccccgaccgacgcgaccgccgtcttcccggccgactccgtgccggcctccgcc
acgggctccgcgctgaccagcgcctcctacaagcgcgccgacctcacctacatgggcgtc
tcgggccgcacggtcaacaccgtgtctcccggcggccacacggcgaccaccgagtacgac
cgcttcggcaacaccgtccgcgaactgtcggcggccaacctggccgtcgcccggggcatc
accgccgccgaccgggccgtacaggccgatctcgggatcgaccggctcaccgtcgcggag
cgggccgacctgctggcgaccaagtccgtgtacgacgagaagggcacccgggagctggag
gagttcgggccgctgcgccggatcgacctcaccgccgacctcaagtccggcaccaccacc
ctcgtcccgtccggaacgccggtgacggcccgcacctggacggtcaacgagttcgacgcc
gggcgccccacggacggcaccgccaaggtccgcgaccagatcacgaagaccaccaccggc
gcccaggtccgcgagcacccgaccgtgctcggtgaggcccggatcacgcagacggtctac
gactgggccaagggcctgccgacgaagacggtcaaggccccgggtggtctcgcgatcacc
gagaccaccgagtacgacgcccaggggcgggtcaccaagcagctcctgcccggggcgacc
ggcagcgacgccgcgacccgggtgacgacgtactggtccgccaccggcaccggcacctgc
cagggccgcccggagtgggccgacctggtctgctccaccggacccgccggcgccatcacc
ggcggtggcagcaacccggccgccctgccgaccaccaccaccgagtacgacgggtggggc
aacccggccaaggcgacggagacggcgaacggggtcacccgcaccacgacgaccacgtac
gacaactccggccgtcagacgaaggtcgcgatcaccggcggtacgggccaggcggtcccc
gagaccaccaccgagtacgaccccgccaccggccgggccgtcaagacggtctcgccgacc
ggcggcaccgtcaccaaggtgttcgacaagctcggccgccaggtgtcctacaccgacgcc
gacggcggtgtgaccacgaccgagtacgacctcctcgaccgaccggtcaaggtcaccgac
aacgccccctcgaccgtcacccacacctacgaccacaccgccgagccgcgcggcctggcc
acgaagaccaccgactccgtcgccggaaccttccaggccacgtacgacgcggacggatcg
gtcagctcggagaagctgcccggcggctacaccctcacccagaccgaggacaccacgggg
tccgccaccgaccgcacctacacccgcgacagtgacggcacgatcgtctactccgacacc
gtgaccgagtccatccacggacaggtcgcctcccacgccggctggtccgaccagacgtac
cgctacgacgcgatcggccgcctcaccaccgtcgaggacaccgccgacaccgtctgcacc
cgccgcgcctacaccttcgacgcgcgcaccaaccgcaagtccctcaccacggcgaccggc
acccccggctccgactgccccaccaccggaggcaccaccaccaaccacacctacgacagc
gccgaccgcctcgtcgacagcggtcacgtctacgacgcgttcggccgcaccacgaccgtc
ccgggcaacgggacgatcggctactacgccaacgacctcgcccaccagcagaccgcgaac
ggcaagcgccagacctggcagctcgacgccaacctgcgcttccgctcctggaagaccgag
accggcagcggctccacctggacccagaccgcgtccaagaccaaccactacgacagcgac
ggcgacaacccccgctggatcaccgaggacaccgcgtcgggcgccctgacccgcaacgtc
gactccgcctccggggacctcgccgccaccacgtccaagacgggtgacaccgtcctccaa
ctcaccaccatccacggcgacgtcgccctccagctcccgctgaccgcgggccaggcgccc
gtcgccctcgactccgacgagtacggcaacccccgcgccggacaggaagccacccgctac
gcctggctcggcgccaagcagcgctccaccgagaccctcaccggcctcaccctcatgggc
gtccgcctctacaacccggccaccggccggttcctgtccatggacccggtccacggcggc
aacgccaacgcctacgagtactgcacggccgaccccatcaactgctacgacctcgatggc
cggttcggctggaagaagtggctgggacgagcgagcacggggttggcggtcgccggcatg
ttcggctgcgccgtctgcgcgggggcctcggcggccatcagcctgggcatcgccgcacac
gactggagaaagggcaagcggcgcgaggcggtcatcggtggcctcacggcattcacctgg
ggcgccggccggctggcctcactcaggcacgcccgctcggtgaaggccatcccgaagaga
tacccgaagggcgtccggaactccggtaccaagaacaagaggtacaggagcaaggcgaag
aagaaggcaaacggatacggcaggaccgcgcggcgcgtcaaccgggtggacttctactat
ggaggtgccgtggccggtcgcagcatctacggggagtacagctcctggcgtagtcgccga
cgctag
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