Streptomyces violaceoruber: B1H20_09155
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Entry
B1H20_09155 CDS
T05124
Name
(GenBank) type IV secretion protein Rhs
Organism
svu
Streptomyces violaceoruber
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T7SS_signal
RHS_repeat
DUF6531
Tox-HNH-EHHH
TEN_YD-shell
RHS
OCRE
WXG100
YL1_C
Motif
Other DBs
NCBI-ProteinID:
ARF66091
UniProt:
A0A1V0ULS9
LinkDB
All DBs
Position
2101356..2106044
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AA seq
1562 aa
AA seq
DB search
MLGDLKDAANSGLGKLEDGIDAGKKLVGEGVDWTTDKIGDGLDHVGAHGAADAVEDWGDE
VASDLGATPGEQQLGETEEANELVHGNPDKIRESAKHLKDFHTAFDHVSSGMRKVDSSGW
AGEGGDAFRKKFGVHPTRWAQAADACEKASGALDAYADTVKWAQGKAKEAVELYKKGKRS
SDDAVDAYNKKVDAYNAKIKANEDPGPKPEPFHDPGKADVKKAYDTLAEARKQRNTAAGD
AQGKVKAALAHAPAEPPPLDRLGNNIVDGYQAYNTELTHVVGGVLKGTAGLMNFARGLNP
TDPYNLTHPAAYMQNVSMTLSGLVSTATHPERIVTAAVDGFKKDPSEFVGRLIPELIGTK
GAGLTRSGIRLGVRSTGRAAIREGENVARRTATKEPHARTEEPPKKYEHDPSDPIDLVSG
KMYLPQTDVTLPGTLPLVFSRRLESGSRLGRWFGPSWLSTLDQRLEIDAEGVIFVTEDGL
LLTYPHPAPRVPTLPTHGSRRWPLHRVDEGYTITDPHTGRTWHFAEQAPDRALLEQIDDR
NGNWITFEHTPEGTPLAVTSFGGYRLTLTVKDERVTALSLAAAAPDGTDQLIKRYSYSES
GDLTQVRDSTGRPLTFTYDERGRVTSWTDSNDRSYTYAYDDQDRCIAEGGEAGHMALRLT
YDDVDPTTGHRVTAATNGEGHTRRYLIDATDQVVAETDPLGHVTRFTRDRFGRVLARTDP
LGRTTSCAYDETGNIVSVTRADGRAVAAEYGDFNRLTRIRGTDGNTTRHTYDARGNRLTS
TTPPGHTTHFTHDEAGRLTSVTDPLGHVTMVRCDRAGLPIQITDSLGAVTRYARDAFGRP
ATMTDPTGRATRLEWTVEGQLARRTAPDGSTESWTYDGEGNCTTHTDPIGGVTRFEYTHF
DLLTARTTPDGVRHEFAHDTELRLTRVTNPQGLTWNYTYDPVGRLISETDFDDRTLTYDH
DPAGHLVSRTNALDEMTTFERDALGRPTRKDAAGQITTYAYDLTDQLAEAVGPDGTRLSI
LRDQYGRVRTETVDDRTLIYDHDELGRRTGRTTPTGAHTSWSYDAAGRRTDLVVSGRPVD
ITYDDAGRELTRGFGDFLILANAYDPMGRLATQTATSDGETLQRRAYTYRADGNLTALDD
HLDGPRTFTLDPAGRVTALHATNWTETYAYDAAGNQTAASWPTTHPGHEATGDRTYAGTR
ITRAGTVRYEHDPLGRITLRQKTRLSRKPATWRYTWDPEDRLRQVTTPDGTLWRYTYDPL
GRRTSKQRLSPDGTTVTAQVTFTWDGTTLCEQTTSAPDLPDPVTLTWDHRGLHPITQTER
ITAADAPQHEIDSRFFAIVTDLIGTPRELVAEDGEIAWHTRTTLWGTTTWNTNATTYTPL
RFPGQYYDPETGLHYNYFRHYDPETARYLSTDPLGLAPAPNAATYVATPSTSCDPLGLAP
DDYLRNKPVGRDLEGAKRDALRDAGIPEGTPPLEVRTHVPATTPEWQGGKQLMGEDHQPI
YYREEVYEHPNGNDLIVYQDHWFGHQKPGEPGYQPAHVHVRPFENTRNGQVPGCEEHYYY
DR
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atcctcggtgatctcaaggacgcggccaactccgggctgggcaagctggaagacggtatc
gacgcgggcaagaagctcgtcggcgagggcgtcgactggacgacggacaagatcggtgac
ggccttgaccatgtcggggcgcacggtgcggccgacgcggtcgaggactggggtgacgag
gtcgcctccgatctcggggccaccccgggcgagcagcagctgggcgagacggaggaggcg
aacgagctcgtccacggcaacccggacaagatccgcgagtccgcgaagcatctcaaggac
ttccacaccgcgttcgaccacgtcagctccggcatgcgcaaggtcgactccagcggctgg
gccggcgagggcggcgacgcgttccgcaagaagttcggcgtgcaccccaccaggtgggcg
caggccgcggatgcgtgcgagaaggcgagcggcgccctggacgcgtacgccgacacggtc
aagtgggcgcagggcaaggcgaaggaggccgtcgagctctacaagaagggcaagaggagc
tcggacgacgcggtcgacgcgtacaacaagaaggtcgacgcctacaacgcgaagatcaag
gcgaacgaggacccggggcccaagcccgagccgttccacgatcccggcaaggccgatgtc
aagaaggcgtacgacacgctcgccgaggcccgcaagcagcgcaacaccgccgccggcgac
gcccagggcaaggtgaaggcggcgctcgcgcacgcgcccgccgagccgccgccgctggac
cggctcggcaacaacatcgtcgacggctaccaggcgtacaacaccgagctcacgcatgtc
gtcggcggtgtcctgaagggcacggcgggcctgatgaacttcgcccgcggcctcaacccc
accgacccctacaacctcacccaccccgcggcctacatgcagaacgtctcgatgacgctc
tccggcctcgtctccaccgccacccaccccgaacgcatcgtgacggccgccgtcgacggc
ttcaagaaggacccctccgagttcgtcggccgcctcatccccgaactgatcggcacgaag
ggggcagggctaacgcgcagcggcatccggctgggggtgcgcagcaccgggcgggcggcg
atccgcgagggcgagaacgtggcgcgcaggacggccacgaaggagccgcacgcccgcacc
gaggaaccgccgaagaagtacgagcacgaccccagcgaccccatcgacctggtcagcggc
aagatgtatctgccgcagacggatgtgacgctgcccggcacgctgccgctggtcttcagc
cgtcgtctggagtcggggtcgcgactgggccgctggttcggcccgtcctggctctcgacg
ctcgaccagcgcctggagatcgacgccgagggcgtcatcttcgtcaccgaggacggcctg
ctcctcacctacccccaccccgccccccgcgtcccgaccctccccacccacggcagccgc
cgctggcctctccaccgcgtggacgagggttacacgatcaccgacccgcacaccggccgc
acctggcacttcgccgagcaggccccggaccgtgccctgctcgaacagatcgacgaccgc
aacggcaactggatcaccttcgagcacacccccgaaggcaccccgctcgccgtcacctcc
tttggcggctaccgcctcaccctcaccgtcaaggacgagcgggtcacggccctgtccctg
gcagccgcggcccctgacggcacggaccagctgatcaagcgctactcctactccgagtcc
ggcgacctcacccaggtccgcgactccaccggacggccgctgacgttcacgtacgacgag
cgcggccgcgtcacgtcctggaccgacagcaacgaccgctcgtacacatacgcgtacgac
gaccaggaccgctgcatcgccgaaggcggcgaagccggccacatggccctccgcctcacc
tacgacgacgtcgacccgacgaccggccaccgcgtcacggcggccaccaacggcgagggc
cacacccgccgctatctgatcgatgccacggatcaggtcgtcgccgagaccgacccgctg
gggcatgtcacccgattcactcgggaccggttcgggcgggtgctggcgcggacagatcct
ctgggacgcacgacgtcgtgcgcgtacgacgagacgggcaacatagtctcggtgacccgc
gccgacggccgcgcggtggcggcggagtacggcgacttcaaccgcctcacccgcatccgc
ggaacggacgggaacaccacccgccacacctacgacgcccgcggcaaccgcctcaccagc
accaccccccccggccacaccactcacttcactcacgacgaagcgggccgtctgacctcc
gtcaccgaccccctcggccacgtcaccatggtccgctgcgaccgggccggcctaccgatc
cagatcaccgactcgctcggcgccgtgacccgctacgcacgtgacgcgttcggccgcccg
gccacgatgacggaccccacgggtcgggccacccgcctggaatggaccgtcgagggtcag
ctcgcccgccgcaccgcccccgacggcagtacggaatcctggacgtacgacggcgagggc
aactgcaccacccacaccgaccccatcggcggcgtcacccgcttcgagtacacccacttc
gacctcctcaccgcccgcaccacccccgacggcgtccgccacgagttcgcccacgacacc
gaactccgtctcacccgcgtcaccaacccccagggcctcacctggaactacacgtacgac
ccggtcggccgcctcatatccgagacggacttcgacgaccgcaccctcacctacgaccac
gacccggcgggccacctcgtatcccgcacgaacgccctcgacgagatgacgacgttcgaa
cgcgacgcactgggccgccccacccgcaaggacgccgcaggccagatcaccacctacgcc
tacgacctcaccgaccaactggccgaggccgtcggccccgacggcacccgcctgagcatc
ctccgcgaccagtacggccgtgttcgcacggaaacggtcgacgaccgcaccctcatctac
gaccacgacgaactcggccgccgcaccggccgcaccacccccaccggcgcccacaccagc
tggtcctacgacgcagcaggccgccgcacggacctggtcgtatccggccgccccgtcgac
atcacctacgacgatgcaggccgcgaactcacgcgcggattcggcgacttcctcatcctc
gccaacgcctacgaccccatgggccgcctggccacccagaccgcgacctcagacggcgag
accctgcaacgccgcgcctacacctaccgagccgacggcaacctcaccgccctcgacgac
cacctcgacggcccccgcaccttcaccctcgacccagcgggccgcgtcaccgccctccac
gccaccaactggaccgagacctacgcctacgacgccgccggcaaccagaccgcagcctcc
tggcccaccacccaccccggccacgaagccaccggcgaccgcacctacgccggcacccgc
atcacccgcgccggcaccgtccgctacgaacacgaccccctcggccgcatcaccctccgc
cagaagacccgcctctcccgcaaacccgccacctggcgctacacatgggacccagaagac
cgtctgcggcaggtcaccacccccgacggcaccctctggcgctacacctacgaccccctc
ggccgccgcacctcaaaacaacgcctgtccccagacggcaccacggtgacagcccaggtc
accttcacctgggacggaaccaccctctgcgaacagaccacatcggcgccggaccttccg
gacccggtcaccctcacctgggaccaccgcggcctgcaccccatcacccagaccgaacgc
atcaccgcagccgacgccccacagcacgagatcgactcccgcttcttcgccatcgtcacc
gacctcatcggcaccccacgcgaactcgtggcagaggacggcgagatcgcctggcacacc
cgcaccaccctctggggcaccaccacctggaacaccaacgccaccacctacacccccctc
cgcttccccggccagtactacgaccccgaaaccgggctccactacaactacttccgccac
tacgacccggagacggcccgctatctcagcacggacccgctcggccttgctcccgcgccc
aacgccgcgacgtatgtcgccaccccgagcacctcgtgcgacccgctgggtctggccccg
gacgactaccttcggaacaaaccggtcggccgagatctggagggcgcgaaacgggatgca
cttcgagacgccggaattccagagggaactccccctctcgaagtcagaacgcatgtcccc
gccaccactccggaatggcagggcggcaagcagctgatgggcgaggaccaccagccgatc
tactaccgcgaggaggtgtacgaacaccccaatgggaatgacctgattgtttaccaggac
cactggttcgggcaccagaagccgggagagcccggatatcagcccgcgcatgtccacgtg
cgcccgttcgagaacacccgcaacggccaggtccccgggtgtgaggaacactattactat
gaccgctag
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integrated database retrieval system
