Streptomyces violaceoruber: B1H20_11890
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Entry
B1H20_11890 CDS
T05124
Name
(GenBank) integration host factor
KO
K03530
DNA-binding protein HU-beta
Organism
svu
Streptomyces violaceoruber
Brite
KEGG Orthology (KO) [BR:
svu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svu03032
]
B1H20_11890
03036 Chromosome and associated proteins [BR:
svu03036
]
B1H20_11890
03400 DNA repair and recombination proteins [BR:
svu03400
]
B1H20_11890
DNA replication proteins [BR:
svu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
B1H20_11890
Chromosome and associated proteins [BR:
svu03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
B1H20_11890
DNA repair and recombination proteins [BR:
svu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
B1H20_11890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
Urease_beta
A_thal_3526
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
ARF62026
UniProt:
A0A1V0UA68
LinkDB
All DBs
Position
complement(2759858..2760139)
Genome browser
AA seq
93 aa
AA seq
DB search
MNRSELVAALADRAEVTRKDADAVLAALAETVGEIVAKGDEKVTIPGFLTFERTHRAART
ARNPQTGDPINIPAGYSVKVSAGSKLKEAAKGK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcagtgagctggtggccgccctggccgaccgcgccgaggtgactcgcaaggac
gccgacgccgtgctggccgcgctcgccgagaccgtcggtgagatcgtcgccaagggtgac
gagaaggtcaccatccccggcttcctgaccttcgagcgcacccaccgtgccgctcgcacc
gctcggaacccgcagaccggcgacccgatcaacatccccgccggctacagcgtgaaggtc
tccgcgggctcgaagctcaaggaagccgccaagggcaagtag
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integrated database retrieval system
