Streptomyces violaceoruber: B1H20_12510
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Entry
B1H20_12510 CDS
T05124
Name
(GenBank) B/F/G family RNA polymerase sigma-70 factor
KO
K03090
RNA polymerase sigma-B factor
Organism
svu
Streptomyces violaceoruber
Brite
KEGG Orthology (KO) [BR:
svu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svu03021
]
B1H20_12510
Transcription machinery [BR:
svu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B1H20_12510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_Crp_2
HTH_24
HTH_23
HTH_3
MarR
DUF7343
Sigma70_ECF
GerE
PNRC
DUF1492
Motif
Other DBs
NCBI-ProteinID:
ARF62133
UniProt:
A0A1V0UA63
LinkDB
All DBs
Position
2916723..2917703
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AA seq
326 aa
AA seq
DB search
MSPRLDGARTHYASSACPQGPTNSDSPAASAVPGPRAGTPSTTSTTTDFSGVTGEELEGL
EGLPEIPPYAEVGALDARALSKTLFERLETLDEGTHEYSYVRNTLVELNLALVKFAASRF
RSRSEPMEDIVQVGTIGLIKAIDRFELSRGVEFPTFAMPTIIGEIKRFFRDTSWSVRVPR
RLQELRLDLAKAGDELSQQLDRAPTVAELSERLGITPEEVVEGMTASNAYTASSLDAKPE
DDEGEGALADRIGYEDNGLEGIEYVESLKPLIAALPARDRMILSLRFVSNMTQSEIGEEL
NISQMHVSRLLSRTLTKLRKGLTVEE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacggagcgcgtacccactacgcgtcgtcggcatgtcctcaggga
ccgaccaattccgactcccccgccgcgagcgccgtccccggcccgcgcgccggcaccccc
agcaccaccagcaccaccacagacttctccggtgtgaccggtgaggagctcgaaggactc
gaaggacttcccgagatcccgccgtacgccgaagtgggcgccctggacgcccgagcgctg
tcgaagacgctcttcgagcgcctggagaccctcgacgagggcacccacgagtacagctac
gtccgcaacaccctcgtcgagctcaacctcgcgctcgtcaagttcgccgcctcccgcttc
cgctcccgcagcgagccgatggaggacatcgtccaggtcggcaccatcggcctgatcaag
gcgatcgaccggttcgagctgagccgcggtgtggagttccccacgttcgcgatgccgacg
atcatcggcgagatcaagcgcttcttccgggacaccagctggtccgtgcgcgtaccgcgc
cggctccaggagctgcggctcgacctggcgaaggccggggacgagctctcccagcagctg
gaccgcgcgcccaccgtggcggagctgtccgagcggctcggcatcaccccggaggaggtc
gtcgagggcatgaccgcgagcaacgcgtacaccgcgagctcgctggacgccaagcccgag
gacgacgagggcgagggcgcgctcgcggaccgcatcggctacgaggacaacggcctcgaa
ggcatcgagtacgtcgagtcgctcaagccgctgatcgccgcgctgcccgcgcgggaccgg
atgatcctctcgctccgcttcgtcagcaacatgacgcagtcggagatcggcgaggagctg
aacatctcgcagatgcacgtgtcgcggctgctctcgcggacgctcaccaagctccgcaag
ggcctgaccgtggaggagtga
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integrated database retrieval system
